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Protein
Submitted name:

F8M12.17 protein

Gene

F8M12.17

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
F8M12.17 proteinImported
Gene namesi
Name:F8M12.17Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Structurei

3D structure databases

ProteinModelPortaliO81617.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini265 – 27814CCHC-typeInterPro annotationAdd
BLAST
Domaini551 – 714164Integrase catalyticInterPro annotationAdd
BLAST
Domaini1484 – 1585102ANK_REP_REGIONInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
3.30.420.10. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR001584. Integrase_cat-core.
IPR005162. Retrotrans_gag_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR029472. UBN2_3.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
PF14244. Retrotran_gag_3. 1 hit.
PF03732. Retrotrans_gag. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 3 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
SSF53098. SSF53098. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O81617-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSMNNPLNS SSLRPPPASV PEQSRYQADQ YENPHHLHTS DHAGLVLVSE
60 70 80 90 100
RLNTASDFHS WRRSIWMALN VRNKLGFIDG TIVKPPLDHR DYGAWSRCND
110 120 130 140 150
TVSTWLMNSV SKKIGQSLLF IPTAEGIWKN MLSRFKQDDA PRVYDIEQRL
160 170 180 190 200
SKIEQGSMDI SAYYTELQTL WEEHKNYVDL PVCTCGRCEC DAAVKWERLQ
210 220 230 240 250
QRSHVTKFLM GLNESYEQTR RHILMLKPIR TIEEAFNIVT QDERQKAIRP
260 270 280 290 300
TPKVDNQDQL KLPLCTNCGK VGHTVQKCYK IIGYPPGYKA ATSYRQPQIQ
310 320 330 340 350
TQPRMQMPQQ SQPRMQQPIQ HLISQFNAQV RVQEPAATSI YTSSPTATIT
360 370 380 390 400
EHGLMAQTST SGTIPFPSTS LKYENNNLTF QNHTLSSLQN VLSSDAWIID
410 420 430 440 450
SGASSHVCSD LTMFRELIHV SGVTVTLPNG TRVAITHTGT ICITSTLILH
460 470 480 490 500
NVLLVPDFKF NLISVCCLEL TRGLMIGRGK TYNNLYILET QRTSFSPSLP
510 520 530 540 550
AATSRHPSLP ALQKLVSSIP SLKSVSSTAS HCRISPLAKQ KRLAYVSHNN
560 570 580 590 600
LASSPFDLIH LDIWGPFSIE SVDGFRYFLT LVDDCTRTTW VYMMKNKSEV
610 620 630 640 650
SNIFPVFVKL IFTQYNAKIK AIRSDNVKEL AFTKFVKEQG MIHQFSCAYT
660 670 680 690 700
PQQNSVVERK HQHLLNIARS LLFQSNVPLQ YWSDCVLTAA YLINRLPSPL
710 720 730 740 750
LDNKTPFELL LKKIPDYTLL KSCLCYASTN VHDRNKFSPR ARPCVFLGYP
760 770 780 790 800
SGYKGYKVLD LESHSISITR NVVFHETKFP FKTSKFLKES VDMFPNSILP
810 820 830 840 850
LPAPLHFVES MPLDDDLRAD DNNASTSNSA SSASSIPPLP STVNTQNTDA
860 870 880 890 900
LDIDTNSVPI ARPKRNAKAP AYLSEYHCNS VPFLSSLSPT TSTSIETPSS
910 920 930 940 950
SIPPKKITTP YPMSTAISYD KLTPLFHSYI CAYNVETEPK AFTQAMKSEK
960 970 980 990 1000
WTRAANEELH ALEQNKTWIV ESLTEGKNVV GCKWVFTIKY NPDGSIERYK
1010 1020 1030 1040 1050
ARLVAQGFTQ QEGIDYMETF SPVAKFGSVK LLLGLAAATG WSLTQMDVSN
1060 1070 1080 1090 1100
AFLHGELDEE IYMSLPQGYT PPTGISLPSK PVCRLLKSLY GLKQASRQWY
1110 1120 1130 1140 1150
KRLSSVFLGA NFIQSPADNT MFVKVSCTSI IVVLVYVDDL MIASNDSSAV
1160 1170 1180 1190 1200
ENLKELLRSE FKIKDLGPAR FFLGLEIARS SEGISVCQRK YAQNLLEDVG
1210 1220 1230 1240 1250
LSGCKPSSIP MDPNLHLTKE MGTLLPNATS YRELVGRLLY LCITRPDITF
1260 1270 1280 1290 1300
AVHTLSQFLS APTDIHMQAA HKVLRYLKGN PGQDADWGTC KDSRRSVTGF
1310 1320 1330 1340 1350
CIYLGTSLIT WKSKKQSVVS RSSTESEYRS LAQATCEIIW LQQLLKDLHV
1360 1370 1380 1390 1400
TMTCPAKLFC DNKSALHLAT NPVFHERTKH IEIDCHTVRD QIKAGKLKTL
1410 1420 1430 1440 1450
HVPTGNQLAD ILTKPLHPGP FHSLLKRIFG SSKCKFESEL GTSTQDENIF
1460 1470 1480 1490 1500
ARLKKVAQVG DIERLYELIA EDPNILDHFD QVSFCETPLH IAAEKGQTHF
1510 1520 1530 1540 1550
AMELMTLKPS LALKLNVLGF SPLHLALQNN HIRTVRGLVA INSSLVSIKG
1560 1570 1580 1590 1600
RGMITPLHHV ARIGDAELLS EFLFACPSSI NDLTSKCETE DCNLQASSSS
1610 1620 1630
GETLMISFCC FLFTHQKRQP PTTSRAKMPN KIR
Length:1,633
Mass (Da):183,045
Last modified:November 1, 1998 - v1
Checksum:i5B4657512408FDC1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080118 Genomic DNA. Translation: AAC33963.1.
PIRiT01879.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080118 Genomic DNA. Translation: AAC33963.1.
PIRiT01879.

3D structure databases

ProteinModelPortaliO81617.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
3.30.420.10. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR001584. Integrase_cat-core.
IPR005162. Retrotrans_gag_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
IPR029472. UBN2_3.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
PF14244. Retrotran_gag_3. 1 hit.
PF03732. Retrotrans_gag. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 3 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
SSF53098. SSF53098. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50994. INTEGRASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO81617_ARATH
AccessioniPrimary (citable) accession number: O81617
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.