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O81160 (SPE2_THECC) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine decarboxylase

Short name=ADC
Short name=ARGDC
EC=4.1.1.19
Gene names
Name:SPE2
OrganismTheobroma cacao (Cacao) (Cocoa)
Taxonomic identifier3641 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeByttnerioideaeTheobroma

Protein attributes

Sequence length406 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-arginine = agmatine + CO2.

Cofactor

Pyridoxal phosphate.

Magnesium.

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1.

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain‹1 – ›406›406Arginine decarboxylase
PRO_0000149955

Regions

Region192 – 20211Substrate-binding By similarity

Amino acid modifications

Modified residue81N6-(pyridoxal phosphate)lysine By similarity

Experimental info

Non-terminal residue11
Non-terminal residue4061

Sequences

Sequence LengthMass (Da)Tools
O81160 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: A736338EE8ADD4D6

FASTA40644,604
        10         20         30         40         50         60 
YQGVYPVKSN QDRFVVEDIV KFGSSFRFGL EAGSKPELLL AMSCLCKGNP EALLVCNGFK 

        70         80         90        100        110        120 
DAEYISLALL ARKLALKHVI VLEQEEEVDM VIDISQKLSV RPVIGVRAKL RTKHSGHFGS 

       130        140        150        160        170        180 
TSGEKGKFGL TTTQVLRVVK KLQDSGMLDC LQLLHFHIGS QIPSTALLSD GVGEAAQIYS 

       190        200        210        220        230        240 
ELVRLGARMK VVDFGGGLGI DYNGSKSGDS DLSVPYGLQE YAHVVNAIRF VCDRKSVKHP 

       250        260        270        280        290        300 
VICSESGRAI VSHHSILIFE AICLTAPATH NEPINIPFIM EGLSEDACAD YWNLRDTAMR 

       310        320        330        340        350        360 
TGDGAFWFYA DQWKQRCVEQ FKEGTLGIEQ LASVDGLCEW VLKAIGASDP VHTYNINLSV 

       370        380        390        400 
FTSIPDLWGI DQLFPIVPIH KLDQRPGARG ILSDLTCDSD GKINKF 

« Hide

References

[1]"Phylogenetic utility of the nuclear gene arginine decarboxylase: an example from Brassicaceae."
Galloway G.L., Malmberg R.L., Price R.A.
Mol. Biol. Evol. 15:1312-1320(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ADC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF045666 Genomic DNA. Translation: AAC68511.1.

3D structure databases

ProteinModelPortalO81160.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00186; UER00284.

Family and domain databases

Gene3D3.20.20.10. 1 hit.
InterProIPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF51419. SSF51419. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPE2_THECC
AccessionPrimary (citable) accession number: O81160
Entry history
Integrated into UniProtKB/Swiss-Prot: February 21, 2001
Last sequence update: November 1, 1998
Last modified: July 9, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways