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O81160

- SPE2_THECC

UniProt

O81160 - SPE2_THECC

Protein

Arginine decarboxylase

Gene

SPE2

Organism
Theobroma cacao (Cacao) (Cocoa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 66 (01 Oct 2014)
      Sequence version 1 (01 Nov 1998)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-arginine = agmatine + CO2.

    Cofactori

    Pyridoxal phosphate.
    Magnesium.

    Pathwayi

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. arginine catabolic process Source: InterPro
    2. putrescine biosynthetic process Source: UniProtKB-KW
    3. spermidine biosynthetic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Biological processi

    Putrescine biosynthesis, Spermidine biosynthesis

    Keywords - Ligandi

    Magnesium, Pyridoxal phosphate

    Enzyme and pathway databases

    UniPathwayiUPA00186; UER00284.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine decarboxylase (EC:4.1.1.19)
    Short name:
    ADC
    Short name:
    ARGDC
    Gene namesi
    Name:SPE2
    OrganismiTheobroma cacao (Cacao) (Cocoa)
    Taxonomic identifieri3641 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeByttnerioideaeTheobroma

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini‹1 – ›406›406Arginine decarboxylasePRO_0000149955Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei8 – 81N6-(pyridoxal phosphate)lysineBy similarity

    Structurei

    3D structure databases

    ProteinModelPortaliO81160.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni192 – 20211Substrate-bindingBy similarityAdd
    BLAST

    Sequence similaritiesi

    Family and domain databases

    Gene3Di3.20.20.10. 1 hit.
    InterProiIPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view]
    PRINTSiPR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMiSSF51419. SSF51419. 1 hit.
    PROSITEiPS00878. ODR_DC_2_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    O81160-1 [UniParc]FASTAAdd to Basket

    « Hide

    YQGVYPVKSN QDRFVVEDIV KFGSSFRFGL EAGSKPELLL AMSCLCKGNP    50
    EALLVCNGFK DAEYISLALL ARKLALKHVI VLEQEEEVDM VIDISQKLSV 100
    RPVIGVRAKL RTKHSGHFGS TSGEKGKFGL TTTQVLRVVK KLQDSGMLDC 150
    LQLLHFHIGS QIPSTALLSD GVGEAAQIYS ELVRLGARMK VVDFGGGLGI 200
    DYNGSKSGDS DLSVPYGLQE YAHVVNAIRF VCDRKSVKHP VICSESGRAI 250
    VSHHSILIFE AICLTAPATH NEPINIPFIM EGLSEDACAD YWNLRDTAMR 300
    TGDGAFWFYA DQWKQRCVEQ FKEGTLGIEQ LASVDGLCEW VLKAIGASDP 350
    VHTYNINLSV FTSIPDLWGI DQLFPIVPIH KLDQRPGARG ILSDLTCDSD 400
    GKINKF 406
    Length:406
    Mass (Da):44,604
    Last modified:November 1, 1998 - v1
    Checksum:iA736338EE8ADD4D6
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11
    Non-terminal residuei406 – 4061

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF045666 Genomic DNA. Translation: AAC68511.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF045666 Genomic DNA. Translation: AAC68511.1 .

    3D structure databases

    ProteinModelPortali O81160.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Enzyme and pathway databases

    UniPathwayi UPA00186 ; UER00284 .

    Family and domain databases

    Gene3Di 3.20.20.10. 1 hit.
    InterProi IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view ]
    PRINTSi PR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMi SSF51419. SSF51419. 1 hit.
    PROSITEi PS00878. ODR_DC_2_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Phylogenetic utility of the nuclear gene arginine decarboxylase: an example from Brassicaceae."
      Galloway G.L., Malmberg R.L., Price R.A.
      Mol. Biol. Evol. 15:1312-1320(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ADC.

    Entry informationi

    Entry nameiSPE2_THECC
    AccessioniPrimary (citable) accession number: O81160
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 21, 2001
    Last sequence update: November 1, 1998
    Last modified: October 1, 2014
    This is version 66 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3