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Protein
Submitted name:

Root-knot nematode resistance protein

Gene

Mi-1.2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defenseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Root-knot nematode resistance proteinImported
Gene namesi
Name:Mi-1.2Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon

Structurei

3D structure databases

ProteinModelPortaliO81137.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini528 – 803276NB-ARCInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.SAAS annotation

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

O81137-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKRKDIEEA NNSLVLFSAL SKDIANVLIF LENEENQKAL DKDQVEKLKL
60 70 80 90 100
KMAFICTYVQ LSYSDFEQFE DIMTRNRQEV ENLLQSLLDD DVLTSLTSNM
110 120 130 140 150
DDCISLYHRS YKSDAIMMDE QLDFLLLNLY HLSKHHAEKI FPGVTQYEVL
160 170 180 190 200
QNVCGNIRDF HGLILNGCIK HEMVENVLPL FQLMAERVGH FLWEDQTDED
210 220 230 240 250
SRLSELDEDE HNDRDSRLFQ LTHLLLKIVP TELEVMHICY TNLKASTSAE
260 270 280 290 300
VGRFIKKLLE TSPDILREYI IQLQEHMLTV IPPSTLGARN IHVMMEFLLL
310 320 330 340 350
ILSDMPKDFI HHDKLFDLLA HVGTLTREVS TLVRDLEEKL RNKEGNNQTN
360 370 380 390 400
CATLDLLENI ELLKKDLKHV YLKAPNSSQC CFPMSDGPLF MHLLHMHLND
410 420 430 440 450
LLDSNAYSIS LIKEEIELVS QELEFIRSFF GDAAEQGLYK DIWARVLDVA
460 470 480 490 500
YEAKDVIDSI IVRDNGLLHL IFSLPITIKK IKLIKEEISA LDENIPKDRG
510 520 530 540 550
LIVVNSPKKP VERKSLTTDK IIVGFEEETN LILRKLTSGP ADLDVISITG
560 570 580 590 600
MPGSGKTTLA YKVYNDKSVS RHFDLRAWCT VDQGYDDKKL LDTIFSQVSG
610 620 630 640 650
SDSNLSENID VADKLRKQLF GKRYLIVLDD VWDTTTLDEL TRPFPEAKKG
660 670 680 690 700
SRIILTTREK EVALHGKLNT DPLDLRLLRP DESWELLDKR TFGNESCPDE
710 720 730 740 750
LLDVGKEIAE NCKGLPLVAD LIAGVIAGRE KKRSVWLEVQ SSLSSFILNS
760 770 780 790 800
EVEVMKVIEL SYDHLPHHLK PCLLHFASWP KDTPLTIYLF TVYLGAEGFV
810 820 830 840 850
EKTEMKGIEE VVKIYMDDLI SSSLVICFNE IGDILNFQIH DLVHDFCLIK
860 870 880 890 900
ARKENLFDRI RSSAPSDLLP RQITIDYDEE EEHFGLNFVM FDSNKKRHSG
910 920 930 940 950
KHLYSLRING DQLDDSVSDA FHLRHLRLIR VLDLEPSLIM VNDSLLNEIC
960 970 980 990 1000
MLNHLRYLRI RTQVKYLPFS FSNLWNLESL FVSNKGSILV LLPRILDLVK
1010 1020 1030 1040 1050
LRVLSVGACS FFDMDADESI LIAKDTKLEN LRILGELLIS YSKDTMNIFK
1060 1070 1080 1090 1100
RFPNLQVLQF ELKESWDYST EQHWFPKLDC LTELETLCVG FKSSNTNHCG
1110 1120 1130 1140 1150
SSVVTNRPWD FHFPSNLKEL LLYDFPLTSD SLSTIARLPN LENLSLYDTI
1160 1170 1180 1190 1200
IQGEEWNMGE EDTFENLKFL NLRLLTLSKW EVGEESFPNL EKLKLQECGK
1210 1220 1230 1240 1250
LEEIPPSFGD IYSLKFIKIV KSPQLEDSAL KIKKYAEDMR GGNDLQILGQ

KNIPLFK
Length:1,257
Mass (Da):144,588
Last modified:November 1, 1998 - v1
Checksum:i8522086B5265A2A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039682 mRNA. Translation: AAC67238.1.
PIRiT06269.
RefSeqiNP_001234063.1. NM_001247134.1.
UniGeneiLes.74.

Genome annotation databases

GeneIDi543551.
KEGGisly:543551.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF039682 mRNA. Translation: AAC67238.1.
PIRiT06269.
RefSeqiNP_001234063.1. NM_001247134.1.
UniGeneiLes.74.

3D structure databases

ProteinModelPortaliO81137.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi543551.
KEGGisly:543551.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO81137_SOLLC
AccessioniPrimary (citable) accession number: O81137
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.