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Protein
Submitted name:

C2H2-type zinc finger family protein

Gene

At2g26940

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • regulation of transcription, DNA-templated Source: TAIR

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
C2H2-type zinc finger family proteinImported
Submitted name:
Putative C2H2-type zinc finger proteinImported
Gene namesi
Ordered Locus Names:At2g26940Imported
ORF Names:F12C20.2Imported, F12C20_2Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G26940
TAIRilocus:2039493 AT2G26940

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G26940.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini49 – 76C2H2-typeInterPro annotationAdd BLAST28
Domaini119 – 141C2H2-typeInterPro annotationAdd BLAST23

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
HOGENOMiHOG000115152
OMAiPPYHEDH
OrthoDBiEOG09360P7X

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequencei

Sequence statusi: Complete.

O81013-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRTRDLYGD ESSSSESEEF HREKIRVKVK LPEERSEDED ESPQPQRKHF
60 70 80 90 100
CVICEKQFSS GKAYGGHVRI HSIEYNNKGK MKKMKKMKLK KKKKRKIGLV
110 120 130 140 150
KKEKEKEIDL ARTDVEGKIR CCLCGKEFQT MHSLFGHMRR HPDRTWKGIR
160 170 180 190 200
PPPPSEKFNL SYLDDDVDDE DEDDDDVMSR SMMMSDVPED VQGAACILMM
210 220 230 240 250
LSYASRNYWA GIEESPKSEV RSSSFYKDDE GKDKVLGDSR MDEKKGLIVD
260 270 280
MKIKMEMEVK VNSPRDEAKR SLGFDLNQPP YHEDHP
Length:286
Mass (Da):33,350
Last modified:November 1, 1998 - v1
Checksum:iD79561F7B8411A7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005168 Genomic DNA Translation: AAC32249.1
CP002685 Genomic DNA Translation: AEC07909.1
PIRiT02641
RefSeqiNP_180262.1, NM_128251.2

Genome annotation databases

EnsemblPlantsiAT2G26940.1; AT2G26940.1; AT2G26940
GeneIDi817235
GrameneiAT2G26940.1; AT2G26940.1; AT2G26940
KEGGiath:AT2G26940

Similar proteinsi

Entry informationi

Entry nameiO81013_ARATH
AccessioniPrimary (citable) accession number: O81013
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 25, 2018
This is version 123 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health