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Protein
Submitted name:

Putative WD-40 repeat protein

Gene

At2g37670

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative WD-40 repeat proteinImported
Submitted name:
WD-40 repeat-containing proteinImported
Gene namesi
Ordered Locus Names:At2g37670Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G37670.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G37670.1.

Structurei

3D structure databases

SMRiO80935. Positions 377-729.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini400 – 584185WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0283. Eukaryota.
ENOG410XQPJ. LUCA.
HOGENOMiHOG000239143.
OMAiINTRSHE.
PhylomeDBiO80935.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 4 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O80935-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDGNKLDRK KTMTMNWEGL GDFEDEDDDR FFETHDRLSS ALTFDMANAS
60 70 80 90 100
SSDEDEDFDD CRLSFSSAVS SLTTASRKFR TPAMSPDYDI WMAAPGSISE
110 120 130 140 150
RRRRLLHGMG LASNKDMVSA VSIRRVVSNA PVVSNGEEKK MKKKMNHEVD
160 170 180 190 200
EQDHDHVPVM LARSRSESDI ERFLIEKRRK EEILGKISKQ RLTRTYSTIC
210 220 230 240 250
PTRTRICQYQ TPIRQTPAVC GNGKALRGGG EALTSVMSNA RVGAFFLIKN
260 270 280 290 300
LDTGKEFIVN EYDEDGMWNR LSDLQTGKQL TLEEFEKCVG YSPVVKELMR
310 320 330 340 350
RENVNRINYE PLMDLRKFNS YLSKSVRLSK RRGAALLKNI KGVAHSMSLR
360 370 380 390 400
VADKDVSDGS TDSPKKGKDH KHGKANEWVK VRPTGKSYKE LSALHMCQEI
410 420 430 440 450
QAHEGAVWTI KFSQDAHYLA SGGADRVIHV WEVQECELMS MNEGSLTPIH
460 470 480 490 500
PSLCDSSGNE ITVVEKKKKG KGSSGRRHNH IPDYVHVPET VFSFSDKPVC
510 520 530 540 550
SLKGHLDAIL DLSWSKSQLL LSSSMDKTVR LWDIETKTCL KLFAHNDYVT
560 570 580 590 600
CIQFSPVDEN YFLSGSLDAK IRIWSIQDRH VVEWSDLHEM VTAACYTPDG
610 620 630 640 650
QGALIGSHKG ICRAYDTEDC KLSQTNQIDV QSNKKSQAKR KITSFQFSPV
660 670 680 690 700
NPSEVLVTSA DSRIRILDGS EVIHKFKGFR NTCSQLSASY SQDGKYIICA
710 720 730 740 750
SEDSQVYLWK NDFHRTRSTL TTQSHEHFHC KDVSAAVPWH GHVRGEPPPV
760 770 780 790 800
QIHSKRHSKR ISTSSQPSST ISSPTKEETS ATGPTTSNRN KKSGLPPMPK
810 820 830 840 850
KAATKSQIQP EEEAGPELGS SESFRSSMNS SEQHSSRFGE SPSINTSSRL
860 870 880 890 900
SSWSWFDSGG HGPQTIQPTA WGMVIVTATV HGEIRSYQNF GLPRRIGRQT

TLF
Length:903
Mass (Da):101,344
Last modified:November 1, 1998 - v1
Checksum:iDD20019B6714959C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004684 Genomic DNA. Translation: AAC23637.1.
CP002685 Genomic DNA. Translation: AEC09432.1.
PIRiT02533.
RefSeqiNP_181303.1. NM_129323.1.
UniGeneiAt.50121.

Genome annotation databases

EnsemblPlantsiAT2G37670.1; AT2G37670.1; AT2G37670.
GeneIDi818344.
GrameneiAT2G37670.1; AT2G37670.1; AT2G37670.
KEGGiath:AT2G37670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004684 Genomic DNA. Translation: AAC23637.1.
CP002685 Genomic DNA. Translation: AEC09432.1.
PIRiT02533.
RefSeqiNP_181303.1. NM_129323.1.
UniGeneiAt.50121.

3D structure databases

SMRiO80935. Positions 377-729.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G37670.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G37670.1; AT2G37670.1; AT2G37670.
GeneIDi818344.
GrameneiAT2G37670.1; AT2G37670.1; AT2G37670.
KEGGiath:AT2G37670.

Organism-specific databases

TAIRiAT2G37670.

Phylogenomic databases

eggNOGiKOG0283. Eukaryota.
ENOG410XQPJ. LUCA.
HOGENOMiHOG000239143.
OMAiINTRSHE.
PhylomeDBiO80935.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 4 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Town C.D., Kaul S.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiO80935_ARATH
AccessioniPrimary (citable) accession number: O80935
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 13, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.