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Protein
Submitted name:

Putative oxidoreductase

Gene

At2g37540

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • pollen tube growth Source: TAIR
Complete GO annotation...

Enzyme and pathway databases

BioCyciARA:AT2G37540-MONOMER.
ReactomeiR-ATH-2453902. The canonical retinoid cycle in rods (twilight vision).
R-ATH-5365859. RA biosynthesis pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative oxidoreductaseImported
Submitted name:
Rossmann-fold NAD(P)-binding domain-containing proteinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:At2g37540Imported
ORF Names:AXX17_AT2G34340Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G37540.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G37540.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the short-chain dehydrogenases/reductases (SDR) family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1208. Eukaryota.
COG1028. LUCA.
OMAiAGWIDAN.
OrthoDBiEOG09360FWV.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O80924-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA
60 70 80 90 100
RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
110 120 130 140 150
SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN
160 170 180 190 200
LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
210 220 230 240 250
AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK
260 270 280 290 300
VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
310 320
NNSLADKLWD FSVFLIDSIS K
Length:321
Mass (Da):34,884
Last modified:November 1, 1998 - v1
Checksum:i981D48093FC65DA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004684 Genomic DNA. Translation: AAC23625.1.
AY099558 mRNA. Translation: AAM20410.1.
BT001244 mRNA. Translation: AAN65131.1.
CP002685 Genomic DNA. Translation: AEC09413.1.
LUHQ01000002 Genomic DNA. Translation: OAP08482.1.
PIRiT02520.
RefSeqiNP_181290.1. NM_129309.3.
UniGeneiAt.43675.
At.66330.

Genome annotation databases

EnsemblPlantsiAT2G37540.1; AT2G37540.1; AT2G37540.
GeneIDi818330.
GrameneiAT2G37540.1; AT2G37540.1; AT2G37540.
KEGGiath:AT2G37540.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004684 Genomic DNA. Translation: AAC23625.1.
AY099558 mRNA. Translation: AAM20410.1.
BT001244 mRNA. Translation: AAN65131.1.
CP002685 Genomic DNA. Translation: AEC09413.1.
LUHQ01000002 Genomic DNA. Translation: OAP08482.1.
PIRiT02520.
RefSeqiNP_181290.1. NM_129309.3.
UniGeneiAt.43675.
At.66330.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G37540.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G37540.1; AT2G37540.1; AT2G37540.
GeneIDi818330.
GrameneiAT2G37540.1; AT2G37540.1; AT2G37540.
KEGGiath:AT2G37540.

Organism-specific databases

TAIRiAT2G37540.

Phylogenomic databases

eggNOGiKOG1208. Eukaryota.
COG1028. LUCA.
OMAiAGWIDAN.
OrthoDBiEOG09360FWV.

Enzyme and pathway databases

BioCyciARA:AT2G37540-MONOMER.
ReactomeiR-ATH-2453902. The canonical retinoid cycle in rods (twilight vision).
R-ATH-5365859. RA biosynthesis pathway.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO80924_ARATH
AccessioniPrimary (citable) accession number: O80924
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.