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Protein

Remorin

Gene

DBP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Exhibits a non sequence-specific DNA-binding activity.

Names & Taxonomyi

Protein namesi
Recommended name:
Remorin
Alternative name(s):
DNA-binding protein
Gene namesi
Name:DBP
Ordered Locus Names:At2g45820
ORF Names:F4I18.20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G45820.
TAIRilocus:2050704. AT2G45820.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003111191 – 190RemorinAdd BLAST190

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei14PhosphoserineCombined sources1
Modified residuei58PhosphothreonineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiO80837.
PRIDEiO80837.

PTM databases

iPTMnetiO80837.
SwissPalmiO80837.

Expressioni

Tissue specificityi

Expressed in roots, leaves, stems, flowers and siliques, with a maximal expression in apical regions.1 Publication

Inductioni

10-fold by auxin, 2-fold by gibberellic acid and not by cytokinin.1 Publication

Gene expression databases

ExpressionAtlasiO80837. baseline and differential.
GenevisibleiO80837. AT.

Interactioni

Subunit structurei

May polymerize to form filamentous structures.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
ARR4O827983EBI-1788073,EBI-625213

Protein-protein interaction databases

BioGridi4526. 9 interactors.
IntActiO80837. 6 interactors.
STRINGi3702.AT2G45820.1.

Structurei

3D structure databases

ProteinModelPortaliO80837.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili92 – 147Sequence analysisAdd BLAST56

Sequence similaritiesi

Belongs to the remorin family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410IX7M. Eukaryota.
ENOG410YI71. LUCA.
HOGENOMiHOG000239299.
InParanoidiO80837.
OMAiANIEAEM.
OrthoDBiEOG09360X56.
PhylomeDBiO80837.

Family and domain databases

InterProiView protein in InterPro
IPR005516. Remorin_C.
IPR005518. Remorin_N.
PfamiView protein in Pfam
PF03763. Remorin_C. 1 hit.
PF03766. Remorin_N. 1 hit.

Sequencei

Sequence statusi: Complete.

O80837-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEEQKTSKV DVESPAVLAP AKEPTPAPVE VADEKIHNPP PVESKALAVV
60 70 80 90 100
EKPIEEHTPK KASSGSADRD VILADLEKEK KTSFIKAWEE SEKSKAENRA
110 120 130 140 150
QKKISDVHAW ENSKKAAVEA QLRKIEEKLE KKKAQYGEKM KNKVAAIHKL
160 170 180 190
AEEKRAMVEA KKGEELLKAE EMGAKYRATG VVPKATCGCF
Length:190
Mass (Da):20,968
Last modified:November 1, 1998 - v1
Checksum:i092A817CF7E1B476
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti168K → E in AAA57124 (PubMed:16666616).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M25268 Genomic DNA. Translation: AAA57124.1.
AC004665 Genomic DNA. Translation: AAC28542.1.
CP002685 Genomic DNA. Translation: AEC10605.1.
AY045996 mRNA. Translation: AAK76670.1.
AY079329 mRNA. Translation: AAL85060.1.
PIRiT02465.
RefSeqiNP_182106.1. NM_130145.6.
UniGeneiAt.24530.

Genome annotation databases

EnsemblPlantsiAT2G45820.1; AT2G45820.1; AT2G45820.
GeneIDi819190.
GrameneiAT2G45820.1; AT2G45820.1; AT2G45820.
KEGGiath:AT2G45820.

Similar proteinsi

Entry informationi

Entry nameiREMO_ARATH
AccessioniPrimary (citable) accession number: O80837
Secondary accession number(s): Q39087
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: November 1, 1998
Last modified: June 7, 2017
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families