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Protein

Agamous-like MADS-box protein AGL23

Gene

AGL23

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probable transcription factor that controls female gametophyte (megagametogenesis) development and chloroplast biogenesis during embryo development.1 Publication

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR
  • protein dimerization activity Source: InterPro

GO - Biological processi

  • chloroplast organization Source: TAIR
  • embryo sac development Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Agamous-like MADS-box protein AGL23Curated
Gene namesi
Name:AGL231 Publication
Ordered Locus Names:At1g65360Imported
ORF Names:T8F5.14Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G65360
TAIRilocus:2206320 AT1G65360

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Disruption phenotypei

Embryonic lethality when homozygous.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004339631 – 226Agamous-like MADS-box protein AGL23Add BLAST226

Proteomic databases

PaxDbiO80807

Expressioni

Developmental stagei

During embryo development, expressed in the functional megaspore until maturity of the embryo sac. After fertilization, expressed in the embryo and endosperm until the early torpedo stage. Not expressed in mature embryo.1 Publication

Gene expression databases

ExpressionAtlasiO80807 baseline and differential
GenevisibleiO80807 AT

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiO80807, 12 interactors
STRINGi3702.AT1G65360.1

Structurei

3D structure databases

ProteinModelPortaliO80807
SMRiO80807
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66MADS-boxPROSITE-ProRule annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili95 – 132Sequence analysisAdd BLAST38

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG0014 Eukaryota
COG5068 LUCA
HOGENOMiHOG000238700
InParanoidiO80807
OMAiIQREETD
OrthoDBiEOG09360N3G
PhylomeDBiO80807

Family and domain databases

Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

O80807-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKKTLGRRK VEIVKMTKES NLQVTFSKRK AGLFKKASEF CTLCDAKIAM
60 70 80 90 100
IVFSPAGKVF SFGHPNVDVL LDHFRGCVVG HNNTNLDESY TKLHVQMLNK
110 120 130 140 150
SYTEVKAEVE KEQKNKQSRA QNERENENAE EWWSKSPLEL NLSQSTCMIR
160 170 180 190 200
VLKDLKKIVD EKAIQLIHQT NPNFYVGSSS NAAAPATVSG GNISTNQGFF
210 220
DQNGMTTNPT QTLLFGFDIM NRTPGV
Length:226
Mass (Da):25,337
Last modified:November 1, 1998 - v1
Checksum:i6F6833ED4E5E864E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004512 Genomic DNA Translation: AAC27145.1
CP002684 Genomic DNA Translation: AEE34365.1
AY141230 mRNA Translation: AAN52794.1
PIRiT02359
RefSeqiNP_176715.1, NM_105210.2
UniGeneiAt.35891

Genome annotation databases

EnsemblPlantsiAT1G65360.1; AT1G65360.1; AT1G65360
GeneIDi842846
GrameneiAT1G65360.1; AT1G65360.1; AT1G65360
KEGGiath:AT1G65360

Similar proteinsi

Entry informationi

Entry nameiAGL23_ARATH
AccessioniPrimary (citable) accession number: O80807
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: November 1, 1998
Last modified: April 25, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health