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Protein
Submitted name:

Putative Ta11-like non-LTR retroelement protein

Gene

At2g07760

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative Ta11-like non-LTR retroelement proteinImported
Submitted name:
Zinc knuckle (CCHC-type) family proteinImported
Gene namesi
Ordered Locus Names:At2g07760Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G07760.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G07760.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini322 – 336CCHC-typeInterPro annotationAdd BLAST15

Phylogenomic databases

eggNOGiKOG1075. Eukaryota.
ENOG410Y65V. LUCA.
OrthoDBiEOG09360SO0.

Family and domain databases

InterProiIPR025558. DUF4283.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF14111. DUF4283. 1 hit.
[Graphical view]
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O80793-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSVSVLTQG KETEVGPKVV VVDSSNVNSV PDPRWPYLTR WTQNSPSPSP
60 70 80 90 100
SVISPSISLV KPLTIGSSPK IARSSSLDFV NLTSSLDSTL PVTVEPPIEH
110 120 130 140 150
VVSITSLSYS AEVSLPTSAL PPIVSATLDE SIAPVKLVSP TLKGAWAKQL
160 170 180 190 200
KFTSSSASQQ DVGGAPMQSH LEATKEDNVR FPWAAKMDPA ARNLYRATSP
210 220 230 240 250
EFMEDGIPKR GLWHVDDCLM FVAPWSTVNT FDLPEISTIP VWVTLKNIPN
260 270 280 290 300
RLYSILGISH IASGLGAPMA TYKPRLDPSL MSEANILVEV ELSKAFPPRI
310 320 330 340 350
AAVDKKGNIS MVNVEYAWIP AKCGKCGQLG HKASRCMKPH LAHEKVTEIV
360 370 380 390 400
SEEIITPAIV SLASATNLVS PITLQTKTPI DVPITNSKIQ IDTVFDIEAG
410 420 430 440 450
PIQDKDNCTG VADCFTNVEA EVVTEETCTV ESVFEIAGTK DKFSRLGSSF
460 470 480 490 500
PDGDSLHSDE DSIVSVESDS GSELMELMTP SGQRLLRERP VKPSIKAKEI
510 520 530
QASSTTRGRG NRGRGNRGRG NRGRGNRGRG
Length:530
Mass (Da):57,076
Last modified:November 1, 1998 - v1
Checksum:i7282B06F5BF79B0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004483 Genomic DNA. Translation: AAC26677.1.
CP002685 Genomic DNA. Translation: AEC06131.1.
PIRiF84488.
RefSeqiNP_178819.1. NM_126778.1.
UniGeneiAt.52696.

Genome annotation databases

EnsemblPlantsiAT2G07760.1; AT2G07760.1; AT2G07760.
GeneIDi815423.
GrameneiAT2G07760.1; AT2G07760.1; AT2G07760.
KEGGiath:AT2G07760.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004483 Genomic DNA. Translation: AAC26677.1.
CP002685 Genomic DNA. Translation: AEC06131.1.
PIRiF84488.
RefSeqiNP_178819.1. NM_126778.1.
UniGeneiAt.52696.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G07760.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G07760.1; AT2G07760.1; AT2G07760.
GeneIDi815423.
GrameneiAT2G07760.1; AT2G07760.1; AT2G07760.
KEGGiath:AT2G07760.

Organism-specific databases

TAIRiAT2G07760.

Phylogenomic databases

eggNOGiKOG1075. Eukaryota.
ENOG410Y65V. LUCA.
OrthoDBiEOG09360SO0.

Family and domain databases

InterProiIPR025558. DUF4283.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF14111. DUF4283. 1 hit.
[Graphical view]
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO80793_ARATH
AccessioniPrimary (citable) accession number: O80793
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.