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O80738

- TPS10_ARATH

UniProt

O80738 - TPS10_ARATH

Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10

Gene

TPS10

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Nov 1998)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

    GO - Molecular functioni

    1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

    GO - Biological processi

    1. trehalose biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT20. Glycosyltransferase Family 20.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (EC:2.4.1.15)
    Alternative name(s):
    Trehalose-6-phosphate synthase 10
    Short name:
    AtTPS10
    Gene namesi
    Name:TPS10
    Synonyms:TPS3
    Ordered Locus Names:At1g60140
    ORF Names:T13D8.4
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G60140.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 861861Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10PRO_0000324831Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei5 – 51PhosphoserineBy similarity
    Modified residuei32 – 321PhosphothreonineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PaxDbiO80738.
    PRIDEiO80738.

    Expressioni

    Gene expression databases

    GenevestigatoriO80738.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G60140.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliO80738.
    SMRiO80738. Positions 139-546.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni59 – 546488GlycosyltransferaseAdd
    BLAST

    Sequence similaritiesi

    In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated
    In the C-terminal section; belongs to the trehalose phosphatase family.Curated

    Phylogenomic databases

    eggNOGiCOG0380.
    HOGENOMiHOG000191476.
    InParanoidiO80738.
    KOiK16055.
    OMAiEEMFENI.
    PhylomeDBiO80738.

    Family and domain databases

    Gene3Di3.40.50.1000. 2 hits.
    InterProiIPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR006379. HAD-SF_hydro_IIB.
    IPR003337. Trehalose_PPase.
    [Graphical view]
    PfamiPF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view]
    SUPFAMiSSF56784. SSF56784. 1 hit.
    TIGRFAMsiTIGR01484. HAD-SF-IIB. 1 hit.
    TIGR00685. T6PP. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    O80738-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGSKSFGNLL DLASGDLLDI PQTPRYLPRV MTVPGIISDV DGYGISDGDS    50
    DVISLPCRER KIIVANFLPL NGKKDSETGK WKFSLDNDSP LLHLKDGFSP 100
    ETEVIYVGSL KTHVDVSEQD EVSHNLFEEF NCVATFLPQD VHKKFYLGFC 150
    KQQLWPLFHY MLPMCPDHGE RFDRGLWQAY VSANKIFADK VMGVINLEED 200
    YIWIHDYHLM VLPTFLRRRF HRVKLGFFLH SPFPSSEIYR TLPVREELLR 250
    GLLNCDLIGF HTFDYARHFL SCCCRMLGLE YESKRGHIAL DYLGRTVFLK 300
    ILPIGIHMGR LESVLNLPAT AEKLKEIQEK YRGKKIILGV DDMDIFKGLS 350
    LKILAFEHLL QQYPSMLGKI VLIQIVNPAR GSGKDVQEAR KETYDTVKRI 400
    NERYGSHDYE PVVLIDRPVP RFEKSAYYAL AECCIVNAVR DGMNLVPYKY 450
    TVCRQGTPSM NKSLGVSDDL PRTSTLVLSE FIGCSPSLSG AIRVNPWDVD 500
    AVADSLYSAI TMSDFEKQLR HKKHFHYIST HDVGYWARSF SQDLERASRD 550
    HYSKRCWGVG WGLGFRLVAL SPNFRRLSIE QTVSAYRRSS KRAIFLDYDG 600
    TLVPETSIVK DPSAEVISAL KALCSDPNNT IFIVSGRGKV SLSEWLAPCE 650
    NLGIAAEHGY FTRWNKSSDW ETSGLSDDLE WKKVVEPIMR LYTETTDGSN 700
    IEAKESALVW HHQDADPDFG SCQAKELLDH LETVLVNEPV IVNRGHQIVE 750
    VKPQGVSKGL VTGKILSRML EDGIAPDFVV CIGDDRSDEE MFENISTTLS 800
    AQSSSMSTEI FACTVGRKPS KAKYFLDEVS DVVKLLQGLA NTSSPKPRYP 850
    SHLRVSFESV V 861
    Length:861
    Mass (Da):97,324
    Last modified:November 1, 1998 - v1
    Checksum:iE00172C50669A7BA
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti412 – 4121V → E in BAF01061. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF155151 mRNA. Translation: AAO15312.1.
    AC004473 Genomic DNA. Translation: AAC24048.1.
    CP002684 Genomic DNA. Translation: AEE33662.1.
    AK229191 mRNA. Translation: BAF01061.1.
    PIRiT02267.
    RefSeqiNP_176221.1. NM_104705.3.
    UniGeneiAt.27896.

    Genome annotation databases

    EnsemblPlantsiAT1G60140.1; AT1G60140.1; AT1G60140.
    GeneIDi842309.
    KEGGiath:AT1G60140.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF155151 mRNA. Translation: AAO15312.1 .
    AC004473 Genomic DNA. Translation: AAC24048.1 .
    CP002684 Genomic DNA. Translation: AEE33662.1 .
    AK229191 mRNA. Translation: BAF01061.1 .
    PIRi T02267.
    RefSeqi NP_176221.1. NM_104705.3.
    UniGenei At.27896.

    3D structure databases

    ProteinModelPortali O80738.
    SMRi O80738. Positions 139-546.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G60140.1-P.

    Protein family/group databases

    CAZyi GT20. Glycosyltransferase Family 20.

    Proteomic databases

    PaxDbi O80738.
    PRIDEi O80738.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G60140.1 ; AT1G60140.1 ; AT1G60140 .
    GeneIDi 842309.
    KEGGi ath:AT1G60140.

    Organism-specific databases

    TAIRi AT1G60140.

    Phylogenomic databases

    eggNOGi COG0380.
    HOGENOMi HOG000191476.
    InParanoidi O80738.
    KOi K16055.
    OMAi EEMFENI.
    PhylomeDBi O80738.

    Gene expression databases

    Genevestigatori O80738.

    Family and domain databases

    Gene3Di 3.40.50.1000. 2 hits.
    InterProi IPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR006379. HAD-SF_hydro_IIB.
    IPR003337. Trehalose_PPase.
    [Graphical view ]
    Pfami PF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56784. SSF56784. 1 hit.
    TIGRFAMsi TIGR01484. HAD-SF-IIB. 1 hit.
    TIGR00685. T6PP. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Isolation and characterization of Arabidopsis trehalose-6-phosphate synthase."
      Kim Y.S., Lee E.J., Kim J.S., Kim C.K., Lim D.H., Chung C.H.
      Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    4. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
      Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
      , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
      Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiTPS10_ARATH
    AccessioniPrimary (citable) accession number: O80738
    Secondary accession number(s): Q0WP88
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 18, 2008
    Last sequence update: November 1, 1998
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3