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Protein

Short-chain dehydrogenase reductase 3c

Gene

SDR3c

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei144SubstrateBy similarity1
Active sitei156Proton acceptorBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi12 – 36NAD or NADPBy similarityAdd BLAST25

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductase

Enzyme and pathway databases

ReactomeiR-ATH-193144 Estrogen biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Short-chain dehydrogenase reductase 3c (EC:1.1.1.-)
Short name:
AtSDR3c
Gene namesi
Name:SDR3c
Ordered Locus Names:At2g47120
ORF Names:F14M4
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G47120
TAIRilocus:2041449 AT2G47120

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004195131 – 258Short-chain dehydrogenase reductase 3cAdd BLAST258

Proteomic databases

PaxDbiO80714

Expressioni

Gene expression databases

ExpressionAtlasiO80714 baseline and differential
GenevisibleiO80714 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G47120.1

Structurei

3D structure databases

ProteinModelPortaliO80714
SMRiO80714
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0725 Eukaryota
COG1028 LUCA
InParanoidiO80714
OMAiKENQHIR
OrthoDBiEOG09360JOY
PhylomeDBiO80714

Family and domain databases

InterProiView protein in InterPro
IPR036291 NAD(P)-bd_dom_sf
IPR002347 SDR_fam
PRINTSiPR00081 GDHRDH
PR00080 SDRFAMILY
SUPFAMiSSF51735 SSF51735, 1 hit

Sequencei

Sequence statusi: Complete.

O80714-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGLRLEGKI VIITGGASGI GADAARLFTD HGAKVVIVDV QEELGQNVAV
60 70 80 90 100
LIGKDKASFY RCDVTNETEV EDAVKFTVEK HGKLDVLFSN AGVLEPLESF
110 120 130 140 150
LDFDLERFDR IMAVNVRGAA AFIKHAARAM VEKGTRGSIV CTTSVSAEIG
160 170 180 190 200
GGHHGYTASK HGLVGLIRSA CGDLGKYGIR VNGVAPYAVA TPMTSHDEVT
210 220 230 240 250
GKQLEDYFDA KGILKGMVLK ASHVAQVALF LASDDSAYIS GQNLAVDGGY

TVVKPSRD
Length:258
Mass (Da):27,259
Last modified:November 1, 1998 - v1
Checksum:i0417B5E23F5B1E90
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004411 Genomic DNA Translation: AAC34218.1
CP002685 Genomic DNA Translation: AEC10804.1
PIRiT02176
RefSeqiNP_182234.1, NM_130280.1
UniGeneiAt.36406

Genome annotation databases

EnsemblPlantsiAT2G47120.1; AT2G47120.1; AT2G47120
GeneIDi819325
GrameneiAT2G47120.1; AT2G47120.1; AT2G47120
KEGGiath:AT2G47120

Similar proteinsi

Entry informationi

Entry nameiSDR3C_ARATH
AccessioniPrimary (citable) accession number: O80714
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2012
Last sequence update: November 1, 1998
Last modified: May 23, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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