O80646 (R15A3_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
40S ribosomal protein S15a-3

Gene names

Name:	RPS15AC
Ordered Locus Names:	At2g39590
ORF Names:	F12L6.25

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	130 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Belongs to the ribosomal protein S8P family.
Sequence caution	The sequence AAC27850.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence ABE65894.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence AEC09697.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 130	130	40S ribosomal protein S15a-3		PRO_0000250168

Sequences

	Sequence		Length	Mass (Da)
	O80646 [UniParc]. Last modified September 19, 2006. Version 2. Checksum: BCF957986B2FF47B	FASTA	130	14,652
	10 20 30 40 50 60 MVRASVLNDC LKSMSNAEKQ GKRQVMIRPS SKVIIKFLTV MQKHGYIAEF EYVDDHRSGK 70 80 90 100 110 120 IVVELNGRLN NCGVISPRYD LGVKEIEGWT AKLLPSRQFG YIVLTTSAGI MDHEEARKKN 130 VGGKVLGFFY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C. Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations." Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P. Plant Biotechnol. J. 4:317-324(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome." Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R., Delseny M., Bailey-Serres J. Plant Physiol. 127:398-415(2001) [PubMed] [Europe PMC] [Abstract] Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC004218 Genomic DNA. Translation: AAC27850.1. Different initiation. CP002685 Genomic DNA. Translation: AEC09697.1. Different initiation. DQ446609 mRNA. Translation: ABE65894.1. Different initiation.
IPI	IPI00522278.
PIR	T00569.
RefSeq	NP_181491.1. NM_129517.1.
UniGene	At.53077.
3D structure databases
HSSP	HSSP built from PDB template 1I6U based on UniProtKB P54041.
ProteinModelPortal	O80646.
SMR	O80646. Positions 1-130.
ModBase	Search...
Proteomic databases
PaxDb	O80646.
PRIDE	O80646.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	818544.
KEGG	ath:AT2G39590.
Organism-specific databases
TAIR	At2g39590.
Phylogenomic databases
eggNOG	COG0096.
InParanoid	O80646.
KO	K02957.
PhylomeDB	O80646.
ProtClustDB	PLN00146.
Gene expression databases
ArrayExpress	O80646.
Genevestigator	O80646.
GermOnline	AT2G39590. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR000630. Ribosomal_S8. [Graphical view]
PANTHER	PTHR11758. PTHR11758. 1 hit.
Pfam	PF00410. Ribosomal_S8. 1 hit. [Graphical view]
SUPFAM	SSF56047. Ribosomal_S8. 1 hit.
PROSITE	PS00053. RIBOSOMAL_S8. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

R15A3_ARATH

Accession

Primary (citable) accession number: O80646
Secondary accession number(s): F4IVX8

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 19, 2006
Last sequence update:	September 19, 2006
Last modified:	April 3, 2013
This is version 73 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program