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Protein

Ergosterol biosynthetic protein 28

Gene

At1g10030

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processLipid biosynthesis, Lipid metabolism, Steroid biosynthesis, Steroid metabolism, Sterol biosynthesis, Sterol metabolism

Names & Taxonomyi

Protein namesi
Recommended name:
Ergosterol biosynthetic protein 28
Gene namesi
Ordered Locus Names:At1g10030
ORF Names:T27I1.5
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRilocus:2201891. AT1G10030.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei4 – 24HelicalSequence analysisAdd BLAST21
Transmembranei46 – 66HelicalSequence analysisAdd BLAST21
Transmembranei71 – 91HelicalSequence analysisAdd BLAST21
Transmembranei96 – 116HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001939061 – 129Ergosterol biosynthetic protein 28Add BLAST129

Proteomic databases

PaxDbiO80594.

Expressioni

Gene expression databases

ExpressionAtlasiO80594. baseline and differential.
GenevisibleiO80594. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi22778. 15 interactors.
IntActiO80594. 8 interactors.
STRINGi3702.AT1G10030.1.

Structurei

3D structure databases

ProteinModelPortaliO80594.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ERG28 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3455. Eukaryota.
ENOG4111J9X. LUCA.
HOGENOMiHOG000005677.
InParanoidiO80594.
OMAiIYQTMAI.
OrthoDBiEOG09360VI8.
PhylomeDBiO80594.

Family and domain databases

InterProiView protein in InterPro
IPR005352. Erg28.
PfamiView protein in Pfam
PF03694. Erg28. 1 hit.

Sequencei

Sequence statusi: Complete.

O80594-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALGYWLMV VGSLRLASVW FGFFNIWALR LAVFSQTTMS EVHGRTFGVW
60 70 80 90 100
TLLTCTLCFL CAFNLENKPL YLATFLSFIY ALGHFLTEYL FYQTMTIANL
110 120
STVGFFAGTS IVWMLLEWNS LEQPHSKLS
Length:129
Mass (Da):14,804
Last modified:May 29, 2007 - v2
Checksum:i57486C86EEA66EE1
GO

Sequence cautioni

The sequence AAC34343 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004122 Genomic DNA. Translation: AAC34343.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE28530.1.
BT008773 mRNA. Translation: AAP68212.1.
AK227737 mRNA. Translation: BAE99721.1.
PIRiT00622.
RefSeqiNP_563858.1. NM_100877.3.
UniGeneiAt.23622.

Genome annotation databases

EnsemblPlantsiAT1G10030.1; AT1G10030.1; AT1G10030.
GeneIDi837538.
GrameneiAT1G10030.1; AT1G10030.1; AT1G10030.
KEGGiath:AT1G10030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004122 Genomic DNA. Translation: AAC34343.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE28530.1.
BT008773 mRNA. Translation: AAP68212.1.
AK227737 mRNA. Translation: BAE99721.1.
PIRiT00622.
RefSeqiNP_563858.1. NM_100877.3.
UniGeneiAt.23622.

3D structure databases

ProteinModelPortaliO80594.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi22778. 15 interactors.
IntActiO80594. 8 interactors.
STRINGi3702.AT1G10030.1.

Proteomic databases

PaxDbiO80594.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G10030.1; AT1G10030.1; AT1G10030.
GeneIDi837538.
GrameneiAT1G10030.1; AT1G10030.1; AT1G10030.
KEGGiath:AT1G10030.

Organism-specific databases

AraportiAT1G10030.
TAIRilocus:2201891. AT1G10030.

Phylogenomic databases

eggNOGiKOG3455. Eukaryota.
ENOG4111J9X. LUCA.
HOGENOMiHOG000005677.
InParanoidiO80594.
OMAiIYQTMAI.
OrthoDBiEOG09360VI8.
PhylomeDBiO80594.

Miscellaneous databases

PROiO80594.

Gene expression databases

ExpressionAtlasiO80594. baseline and differential.
GenevisibleiO80594. AT.

Family and domain databases

InterProiView protein in InterPro
IPR005352. Erg28.
PfamiView protein in Pfam
PF03694. Erg28. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiERG28_ARATH
AccessioniPrimary (citable) accession number: O80594
Secondary accession number(s): Q7Y031
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: May 29, 2007
Last modified: February 15, 2017
This is version 94 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.