Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ergosterol biosynthetic protein 28

Gene

At1g10030

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Lipid biosynthesis, Lipid metabolism, Steroid biosynthesis, Steroid metabolism, Sterol biosynthesis, Sterol metabolism

Names & Taxonomyi

Protein namesi
Recommended name:
Ergosterol biosynthetic protein 28
Gene namesi
Ordered Locus Names:At1g10030
ORF Names:T27I1.5
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G10030.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei4 – 2421HelicalSequence analysisAdd
BLAST
Transmembranei46 – 6621HelicalSequence analysisAdd
BLAST
Transmembranei71 – 9121HelicalSequence analysisAdd
BLAST
Transmembranei96 – 11621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 129129Ergosterol biosynthetic protein 28PRO_0000193906Add
BLAST

Proteomic databases

PaxDbiO80594.

Expressioni

Gene expression databases

GenevisibleiO80594. AT.

Interactioni

Protein-protein interaction databases

BioGridi22778. 15 interactions.
IntActiO80594. 8 interactions.
STRINGi3702.AT1G10030.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ERG28 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3455. Eukaryota.
ENOG4111J9X. LUCA.
HOGENOMiHOG000005677.
InParanoidiO80594.
OMAiIYQTMAI.
OrthoDBiEOG09360VI8.
PhylomeDBiO80594.

Family and domain databases

InterProiIPR005352. Erg28.
[Graphical view]
PfamiPF03694. Erg28. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O80594-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALGYWLMV VGSLRLASVW FGFFNIWALR LAVFSQTTMS EVHGRTFGVW
60 70 80 90 100
TLLTCTLCFL CAFNLENKPL YLATFLSFIY ALGHFLTEYL FYQTMTIANL
110 120
STVGFFAGTS IVWMLLEWNS LEQPHSKLS
Length:129
Mass (Da):14,804
Last modified:May 29, 2007 - v2
Checksum:i57486C86EEA66EE1
GO

Sequence cautioni

The sequence AAC34343 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004122 Genomic DNA. Translation: AAC34343.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE28530.1.
BT008773 mRNA. Translation: AAP68212.1.
AK227737 mRNA. Translation: BAE99721.1.
PIRiT00622.
RefSeqiNP_563858.1. NM_100877.2.
UniGeneiAt.23622.

Genome annotation databases

EnsemblPlantsiAT1G10030.1; AT1G10030.1; AT1G10030.
GeneIDi837538.
GrameneiAT1G10030.1; AT1G10030.1; AT1G10030.
KEGGiath:AT1G10030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004122 Genomic DNA. Translation: AAC34343.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE28530.1.
BT008773 mRNA. Translation: AAP68212.1.
AK227737 mRNA. Translation: BAE99721.1.
PIRiT00622.
RefSeqiNP_563858.1. NM_100877.2.
UniGeneiAt.23622.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi22778. 15 interactions.
IntActiO80594. 8 interactions.
STRINGi3702.AT1G10030.1.

Proteomic databases

PaxDbiO80594.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G10030.1; AT1G10030.1; AT1G10030.
GeneIDi837538.
GrameneiAT1G10030.1; AT1G10030.1; AT1G10030.
KEGGiath:AT1G10030.

Organism-specific databases

TAIRiAT1G10030.

Phylogenomic databases

eggNOGiKOG3455. Eukaryota.
ENOG4111J9X. LUCA.
HOGENOMiHOG000005677.
InParanoidiO80594.
OMAiIYQTMAI.
OrthoDBiEOG09360VI8.
PhylomeDBiO80594.

Miscellaneous databases

PROiO80594.

Gene expression databases

GenevisibleiO80594. AT.

Family and domain databases

InterProiIPR005352. Erg28.
[Graphical view]
PfamiPF03694. Erg28. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiERG28_ARATH
AccessioniPrimary (citable) accession number: O80594
Secondary accession number(s): Q7Y031
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: May 29, 2007
Last modified: September 7, 2016
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.