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Protein

Ferredoxin-2, chloroplastic

Gene

FDX2

Organism
Zea mays (Maize)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Occupies a key position both for transferring the photoreducing power to Fd-NADP+ oxidoreductase (FNR), hence the formation of NADPH, and for mediating the cyclic electron flow around photosystem I (PSI).1 Publication

Cofactori

[2Fe-2S] clusterCuratedNote: Binds 1 [2Fe-2S] cluster.

Redox potential

E0 is -406 mV.1 Publication

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi83 – 831Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation
Metal bindingi88 – 881Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation
Metal bindingi91 – 911Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation
Metal bindingi121 – 1211Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

2Fe-2S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin-2, chloroplastic1 Publication
Alternative name(s):
Ferredoxin II1 Publication
Short name:
Fd II1 Publication
Gene namesi
Name:FDX21 Publication
Synonyms:pFD21 Publication
Ordered Locus Names:GrmZm2g048313Curated
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeTripsacinaeZea
Proteomesi
  • UP000007305 Componenti: Chromosome 6

Organism-specific databases

MaizeGDBi66392.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi109 – 1091N → D: Increased affinity for Fd-NADP(+) oxidoreductase and increased electron-transfer activity. 1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 4444Chloroplast1 PublicationAdd
BLAST
Chaini45 – 14096Ferredoxin-2, chloroplasticPRO_0000433609Add
BLAST

Proteomic databases

PaxDbiO80429.

Expressioni

Tissue specificityi

Expressed almost exclusively in bundle-sheath.1 Publication

Gene expression databases

GenevisibleiO80429. ZM.

Interactioni

Protein-protein interaction databases

STRINGi4577.GRMZM2G048313_P01.

Structurei

3D structure databases

ProteinModelPortaliO80429.
SMRiO80429. Positions 45-139.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 137912Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.Curated
Contains 1 2Fe-2S ferredoxin-type domain.PROSITE-ProRule annotation

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IYGQ. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
KOiK02639.
OMAiSAMASYN.
OrthoDBiEOG09360RVH.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O80429-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAATALSMSI LRAPPPCFSS PLRLRVAVAK PLAAPMRRQL LRAQATYNVK
60 70 80 90 100
LITPEGEVEL QVPDDVYILD FAEEEGIDLP FSCRAGSCSS CAGKVVSGSV
110 120 130 140
DQSDQSFLND NQVADGWVLT CAAYPTSDVV IETHKEDDLL
Length:140
Mass (Da):15,086
Last modified:November 1, 1998 - v1
Checksum:i9808821CD48372A3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti58 – 581V → M in ACG46956 (PubMed:18937034).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016810 mRNA. Translation: BAA32348.1.
EU328186 mRNA. Translation: ACA34368.1.
BT039722 mRNA. Translation: ACF84727.1.
EU974838 mRNA. Translation: ACG46956.1.
PIRiT01170.
RefSeqiNP_001104844.1. NM_001111374.1.
UniGeneiZm.7282.

Genome annotation databases

EnsemblPlantsiGRMZM2G048313_T01; GRMZM2G048313_P01; GRMZM2G048313.
GeneIDi541619.
GrameneiGRMZM2G048313_T01; GRMZM2G048313_P01; GRMZM2G048313.
KEGGizma:541619.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016810 mRNA. Translation: BAA32348.1.
EU328186 mRNA. Translation: ACA34368.1.
BT039722 mRNA. Translation: ACF84727.1.
EU974838 mRNA. Translation: ACG46956.1.
PIRiT01170.
RefSeqiNP_001104844.1. NM_001111374.1.
UniGeneiZm.7282.

3D structure databases

ProteinModelPortaliO80429.
SMRiO80429. Positions 45-139.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4577.GRMZM2G048313_P01.

Proteomic databases

PaxDbiO80429.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGRMZM2G048313_T01; GRMZM2G048313_P01; GRMZM2G048313.
GeneIDi541619.
GrameneiGRMZM2G048313_T01; GRMZM2G048313_P01; GRMZM2G048313.
KEGGizma:541619.

Organism-specific databases

MaizeGDBi66392.

Phylogenomic databases

eggNOGiENOG410IYGQ. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
KOiK02639.
OMAiSAMASYN.
OrthoDBiEOG09360RVH.

Gene expression databases

GenevisibleiO80429. ZM.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFER2_MAIZE
AccessioniPrimary (citable) accession number: O80429
Secondary accession number(s): B6UC73
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 22, 2015
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.