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O80404 (O80404_9ROSI) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length311 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 EMBL BAA31131.1
Chain20 – 311292 Potential EMBL BAA31131.1
PRO_5000049234
Chain20 – 310291 EMBL BAA31131.1
PRO_5000049235

Sequences

Sequence LengthMass (Da)Tools
O80404 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: CDB50E72B4B111E3

FASTA31133,644
        10         20         30         40         50         60 
MKLHTLIVLA FAFVLGAAAE QCGRQANGAL CPNRLCCSQF GWCGNTDEYC KNNCQSQCTP 

        70         80         90        100        110        120 
PSTGGGGGGG SVGSIINEAL YNQMLKYSKD PRCPSNGFYR YNAFITAAQS FSGFGTTGDA 

       130        140        150        160        170        180 
ATRKRELAAF FGQTSHETTG GWATAPDGPY AWGYCFIRER NQDVYCSPNQ QWPCAAGQKY 

       190        200        210        220        230        240 
YGRGPIQLTH NYNYGPAGRA LNLNLLNNPD LVATDPVVAF KTAIWFWMTP QGNKPSCHDV 

       250        260        270        280        290        300 
ITGRWQPSAA DSAAGRVPGY GVITNIINGG LECGRGADSR VADRIGFYKR YCDLLGIGYG 

       310 
NNLDCNNQRS F 

« Hide

References

[1]"cDNA cloning and gene expression of chitinase in pumpkin callus."
Arie M., Hikichi K., Takahashi K., Esaka M.
Submitted (JUN-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Fruit EMBL BAA31131.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB015655 mRNA. Translation: BAA31131.1.

3D structure databases

ProteinModelPortalO80404.
SMRO80404. Positions 20-311.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyCBM18. Carbohydrate-Binding Module Family 18.
GH19. Glycoside Hydrolase Family 19.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.60.10. 1 hit.
InterProIPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR016283. Glyco_hydro_19.
IPR000726. Glyco_hydro_19_cat.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamPF00187. Chitin_bind_1. 1 hit.
PF00182. Glyco_hydro_19. 1 hit.
[Graphical view]
PIRSFPIRSF001060. Endochitinase. 1 hit.
PRINTSPR00451. CHITINBINDNG.
ProDomPD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEPS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
PS00774. CHITINASE_19_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO80404_9ROSI
AccessionPrimary (citable) accession number: O80404
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: February 19, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)