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Protein
Submitted name:

LukS-PV

Gene
N/A
Organism
Staphylococcus phage PVL
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
LukS-PVImported
OrganismiStaphylococcus phage PVLImported
Taxonomic identifieri71366 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageCaudoviralesSiphoviridae
Proteomesi
  • UP000000976 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4IYAX-ray1.55A29-312[»]
4IYCX-ray2.75A/B/C/D29-312[»]
4IYTX-ray2.20A29-312[»]
4IZLX-ray2.80A/B/C/D29-312[»]
4J0OX-ray2.50A/B/C/D30-312[»]
ProteinModelPortaliO80066.
SMRiO80066.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini57 – 303LeukocidinInterPro annotationAdd BLAST247

Phylogenomic databases

KOiK11038.

Family and domain databases

Gene3Di2.70.240.10. 1 hit.
InterProiIPR003963. Bi-component_toxin_staph.
IPR016183. Leukocidin/porin.
[Graphical view]
PfamiPF07968. Leukocidin. 1 hit.
[Graphical view]
PRINTSiPR01468. BICOMPNTOXIN.
SUPFAMiSSF56959. SSF56959. 1 hit.
TIGRFAMsiTIGR01002. hlyII. 1 hit.

Sequencei

Sequence statusi: Complete.

O80066-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKKRLLAAT LSLGIITPIA TSFHESKADN NIENIGDGAE VVKRTEDTSS
60 70 80 90 100
DKWGVTQNIQ FDFVKDKKYN KDALILKMQG FINSKTTYYN YKNTDHIKAM
110 120 130 140 150
RWPFQYNIGL KTNDPNVDLI NYLPKNKIDS VNVSQTLGYN IGGNFNSGPS
160 170 180 190 200
TGGNGSFNYS KTISYNQQNY ISEVEHQNSK SVQWGIKANS FITSLGKMSG
210 220 230 240 250
HDPNLFVGYK PYSQNPRDYF VPDNELPPLV HSGFNPSFIA TVSHEKGSGD
260 270 280 290 300
TSEFEITYGR NMDVTHATRR TTHYGNSYLE GSRIHNAFVN RNYTVKYEVN
310
WKTHEIKVKG HN
Length:312
Mass (Da):35,294
Last modified:November 1, 1998 - v1
Checksum:i722EBCCA7465D53C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB009866 Genomic DNA. Translation: BAA31900.1.
PIRiT00160.
RefSeqiNP_058465.1. NC_002321.1.

Genome annotation databases

GeneIDi1262726.
KEGGivg:1262726.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB009866 Genomic DNA. Translation: BAA31900.1.
PIRiT00160.
RefSeqiNP_058465.1. NC_002321.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4IYAX-ray1.55A29-312[»]
4IYCX-ray2.75A/B/C/D29-312[»]
4IYTX-ray2.20A29-312[»]
4IZLX-ray2.80A/B/C/D29-312[»]
4J0OX-ray2.50A/B/C/D30-312[»]
ProteinModelPortaliO80066.
SMRiO80066.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1262726.
KEGGivg:1262726.

Phylogenomic databases

KOiK11038.

Family and domain databases

Gene3Di2.70.240.10. 1 hit.
InterProiIPR003963. Bi-component_toxin_staph.
IPR016183. Leukocidin/porin.
[Graphical view]
PfamiPF07968. Leukocidin. 1 hit.
[Graphical view]
PRINTSiPR01468. BICOMPNTOXIN.
SUPFAMiSSF56959. SSF56959. 1 hit.
TIGRFAMsiTIGR01002. hlyII. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO80066_9CAUD
AccessioniPrimary (citable) accession number: O80066
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.