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Protein

Probable RuBisCO transcriptional regulator

Gene

rbcR

Organism
Guillardia theta (Cryptomonas phi)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Trans-acting transcriptional regulator of RuBisCO genes (rbcL and rbcS) expression.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Probable RuBisCO transcriptional regulator
Gene namesi
Name:rbcR
Synonyms:ycf30
Encoded oniPlastid; Chloroplast
OrganismiGuillardia theta (Cryptomonas phi)
Taxonomic identifieri55529 [NCBI]
Taxonomic lineageiEukaryotaCryptophytaPyrenomonadalesGeminigeraceaeGuillardia

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001057711 – 310Probable RuBisCO transcriptional regulatorAdd BLAST310

Structurei

3D structure databases

ProteinModelPortaliO78432
SMRiO78432
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 63HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

HOGENOMiHOG000233518
OMAiYLMPRMI

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O78432-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLPFTLDQ LRILKAIASE GSFKKAAESL YISQPAVSLQ IQNLEKQLNI
60 70 80 90 100
PIFDRANRKA VFTEEGDTLL RYGNRVLSLC DETCRAIEDL KTLQGGTLII
110 120 130 140 150
GASQTTGTYL MPRLIGLFRH KYPQIAVQLQ VHSTRRVAWS VANGQVNLAV
160 170 180 190 200
VGGKVPDELR SKLQITPYVD DELALILPKL HPFSKLEVIQ KEDLYRLRFI
210 220 230 240 250
TLDKQSTIRR VIDTVLNEHG IDSARFKIEM ELNSVEAIKN AVQSGLGAAF
260 270 280 290 300
VSISAIAKEL ELGLLHWVKI EGVVIKRTLS IITNPSRYQA KASEIFSKEI
310
LTLFVTPYEI
Length:310
Mass (Da):34,728
Last modified:November 1, 1998 - v1
Checksum:i708366328B57BC03
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF041468 Genomic DNA Translation: AAC35617.1
RefSeqiNP_050683.1, NC_000926.1

Genome annotation databases

GeneIDi856973

Entry informationi

Entry nameiRBCR_GUITH
AccessioniPrimary (citable) accession number: O78432
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: November 1, 1998
Last modified: March 28, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

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