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Unreviewed, UniProtKB/TrEMBL O77425 (O77425_DROME)

Last modified July 7, 2009. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    CG13369 EMBL AAF45527.1
    EC=2.7.1.15
Submitted name:
    EG:115C2.1 protein EMBL CAA20884.1
    RH09469p EMBL AAX33381.1
Gene names
Name: Dredd FlyBase FBgn0020381
Synonyms: EG:115C2.1 EMBL AAX33381.1
ORF Names: CG13369 FlyBase FBgn0025640, Dmel_CG13369 EMBL AAF45527.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the carbohydrate kinase pfkB family. RuleBase RU003704V0

Ontologies

Keywords
   Molecular functionKinase RuleBase RU003704V0
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processD-ribose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

ribokinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O77425-1 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: BD051438EC4D3813

FASTA30431,626
        10         20         30         40         50         60 
MAQTEVLVFG SAIIDFISYT TRLPKAGETL HGHRFQIGYG GKGANQCVAA ARQGSRTALV 

        70         80         90        100        110        120 
AKLGADTFGS DYLRHLREER VNVNHVEQLA EETTGVAQIA VSDGGENNII IVVGANNRLS 

       130        140        150        160        170        180 
SCDVSSAKAL FQEAKVLVCQ LETPVEATLT ALRAFRGVSI VNAAPAMADT PPELLQLASI 

       190        200        210        220        230        240 
FCVNESEAAL MTQMPDIGNI EHAEDAVGKL IAAGANTVII TLGKLGAVFG SADSKGVCQH 

       250        260        270        280        290        300 
VAAPSVPPEK VVDTTGAGDA FIGALAHNLA RHPTRKLEEH IAAACAVASQ SVQLPGTQSS 


FPHA 

« Hide

References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAX33381.1.
[4]"Sequencing the distal X chromosome of Drosophila melanogaster."
Catherine Salles, Philippe Valenti, Areti Darlamitsou, Nadine Henderson, Lorna Campbell, David Glover
Submitted (SEP-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Benos P.
Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AE014298 Genomic DNA. Translation: AAF45527.1.
BT021233 mRNA. Translation: AAX33381.1.
AL031581 Genomic DNA. Translation: CAA20884.1.
PIRT13380.
RefSeqNP_569850.1.
UniGeneDm.31030

3D structure databases

HSSPHSSP built from PDB template 1DGM based on UniProtKB Q9TVW2.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP:20885N.
IntActO77425. 2 interactions.

Proteomic databases

PRIDEO77425.

Genome annotation databases

EnsemblFBgn0025640. Drosophila melanogaster. [Contig view]
GeneID31007.
KEGGdme:Dmel_CG13369.
NMPDRfig|7227.3.peg.15924.

Organism-specific databases

FlyBaseFBgn0025640. CG13369.

Phylogenomic databases

HOGENOMO77425.
OMAO77425. VNKEGEN.

Gene expression databases

ArrayExpressO77425.

Family and domain databases

InterProIPR011611. Carb/pur_kinase.
IPR002173. Carboh/pur_kinase_PfkB_CS.
IPR002139. Ribokinase.
[Graphical view]
PfamPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSPR00990. RIBOKINASE.
PROSITEPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio771450.

Entry information

Entry nameO77425_DROME
AccessionPrimary (citable) accession number: O77425
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: July 7, 2009
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information