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Protein
Submitted name:

40S ribosomal protein S11, putative

Gene

PF3D7_0317600

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-PFA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-PFA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-PFA-72689. Formation of a pool of free 40S subunits.
R-PFA-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-PFA-72702. Ribosomal scanning and start codon recognition.
R-PFA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-PFA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-PFA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein S11, putativeImported
Gene namesi
ORF Names:PF3D7_0317600Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0317600.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiO77381.

PTM databases

SwissPalmiO77381.

Interactioni

Protein-protein interaction databases

IntActiO77381. 3 interactions.
MINTiMINT-1592353.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J7Aelectron microscopy3.20V1-161[»]
3JBNelectron microscopy4.70V6-161[»]
3JBOelectron microscopy5.80V6-161[»]
3JBPelectron microscopy6.70V6-161[»]
ProteinModelPortaliO77381.
SMRiO77381. Positions 6-161.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 7467Ribosomal_S17_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S17P family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000231341.
InParanoidiO77381.
KOiK02949.
OMAiISPCFRI.
PhylomeDBiO77381.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_01345_B. Ribosomal_S17_B.
InterProiIPR012340. NA-bd_OB-fold.
IPR032440. Ribosomal_S11_N.
IPR000266. Ribosomal_S17/S11.
IPR028333. Ribosomal_S17_arc-typ.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
PF16205. Ribosomal_S17_N. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03630. uS17_arch. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O77381-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTLDVQHE RAYQKQEGAS FFNSKKIKKG SKSYIRYWKK VGLGFATPKE
60 70 80 90 100
AKEGVYVDKK CPFTGNVSIR GRILKGMVIS NKMKRTIIIR RNYLHYVKKY
110 120 130 140 150
NRFEKRHKNI PCHCSPCFDV KEGDIVTVGQ CRPLSKTVRF NVLHVEKHQI
160
FGSARKQFVL F
Length:161
Mass (Da):18,760
Last modified:October 1, 2000 - v2
Checksum:i7119A69AA860BBFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA. Translation: CAB11137.2.
PIRiT18498.
RefSeqiXP_001351246.1. XM_001351210.1.

Genome annotation databases

EnsemblProtistsiPFC0775w:mRNA; PFC0775w:pep; PFC0775w.
GeneDBiPF3D7_0317600.1:pep.
GeneIDi814490.
KEGGipfa:PFC0775w.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA. Translation: CAB11137.2.
PIRiT18498.
RefSeqiXP_001351246.1. XM_001351210.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3J7Aelectron microscopy3.20V1-161[»]
3JBNelectron microscopy4.70V6-161[»]
3JBOelectron microscopy5.80V6-161[»]
3JBPelectron microscopy6.70V6-161[»]
ProteinModelPortaliO77381.
SMRiO77381. Positions 6-161.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO77381. 3 interactions.
MINTiMINT-1592353.

PTM databases

SwissPalmiO77381.

Proteomic databases

PRIDEiO77381.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiPFC0775w:mRNA; PFC0775w:pep; PFC0775w.
GeneDBiPF3D7_0317600.1:pep.
GeneIDi814490.
KEGGipfa:PFC0775w.

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0317600.

Phylogenomic databases

HOGENOMiHOG000231341.
InParanoidiO77381.
KOiK02949.
OMAiISPCFRI.
PhylomeDBiO77381.

Enzyme and pathway databases

ReactomeiR-PFA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-PFA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-PFA-72689. Formation of a pool of free 40S subunits.
R-PFA-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-PFA-72702. Ribosomal scanning and start codon recognition.
R-PFA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-PFA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-PFA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_01345_B. Ribosomal_S17_B.
InterProiIPR012340. NA-bd_OB-fold.
IPR032440. Ribosomal_S11_N.
IPR000266. Ribosomal_S17/S11.
IPR028333. Ribosomal_S17_arc-typ.
IPR019979. Ribosomal_S17_CS.
[Graphical view]
PANTHERiPTHR10744. PTHR10744. 1 hit.
PfamiPF00366. Ribosomal_S17. 1 hit.
PF16205. Ribosomal_S17_N. 1 hit.
[Graphical view]
PRINTSiPR00973. RIBOSOMALS17.
ProDomiPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR03630. uS17_arch. 1 hit.
PROSITEiPS00056. RIBOSOMAL_S17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate 3D7Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate 3D7Imported.
  3. "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13."
    Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T., Christodoulou Z.
    , Clark L., Clark R., Corton C., Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., Sulston J.E., Craig A., Newbold C., Barrell B.G.
    Nature 419:527-531(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate 3D7Imported.
  4. "Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine."
    Wong W., Bai X.C., Brown A., Fernandez I.S., Hanssen E., Condron M., Tan Y.H., Baum J., Scheres S.H.
    Elife 3:e03080-e03080(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.20 ANGSTROMS).
  5. "Dynamical features of the Plasmodium falciparum ribosome during translation."
    Sun M., Li W., Blomqvist K., Das S., Hashem Y., Dvorin J.D., Frank J.
    Nucleic Acids Res. 43:10515-10524(2015) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.70 ANGSTROMS) OF 6-161.

Entry informationi

Entry nameiO77381_PLAF7
AccessioniPrimary (citable) accession number: O77381
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: October 1, 2000
Last modified: June 8, 2016
This is version 114 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.