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Protein
Submitted name:

Homeodomain protein

Gene

DthoxC

Organism
Girardia tigrina (Planarian) (Dugesia tigrina)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeodomain proteinImported
Gene namesi
Name:DthoxCImported
OrganismiGirardia tigrina (Planarian) (Dugesia tigrina)Imported
Taxonomic identifieri6162 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesRhabditophoraSeriataTricladidaContinenticolaGeoplanoideaDugesiidaeGirardia

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO76937.
SMRiO76937. Positions 174-232.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains homeobox DNA-binding domain.SAAS annotation

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O76937-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHVDPNVPNP LQNSPSKLLS SKSSNHLPLS NLSKSSQIPA IGRYWPASIS
60 70 80 90 100
KVSSSEHFGS LIATNFYSNS KVFPNSPWST HFPANDLAFD SSVFDSRRPH
110 120 130 140 150
EESYLNAVPH FSSSQFSPYS QTCRQLIYPS ISTYESSESK ISDININPVS
160 170 180 190 200
NNVMLYSWMN PKSSGDNTNN TNNKRTRQTY TRHQTLELEK EFHFNKYLTR
210 220 230 240 250
RRRIEIAHTL ILTERQIKIW FQNRRMKWKK EHNIAKLTGP GSCDQLELVK

TYNISQQYN
Length:259
Mass (Da):29,892
Last modified:November 1, 1998 - v1
Checksum:iC1D022B1EEFED25D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X95416 Genomic DNA. Translation: CAA64696.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X95416 Genomic DNA. Translation: CAA64696.1.

3D structure databases

ProteinModelPortaliO76937.
SMRiO76937. Positions 174-232.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Planarian Hox genes: novel patterns of expression during regeneration."
    Bayascas J.R., Castillo E., Munoz-Marmol A.M., Salo E.
    Development 124:141-148(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Platyhelminthes have a hox code differentially activated during regeneration, with genes closely related to those of spiralian protostomes."
    Bayascas J.R., Castillo E., Salo E.
    Dev. Genes Evol. 208:467-473(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO76937_GIRTI
AccessioniPrimary (citable) accession number: O76937
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: October 29, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.