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Protein
Submitted name:

EG:132E8.1 protein

Gene

ssx

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: FlyBase
  • nucleotide binding Source: InterPro

GO - Biological processi

  • defense response to bacterium Source: FlyBase
Complete GO annotation...

Keywords - Ligandi

RNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
EG:132E8.1 proteinImported
Submitted name:
Sister-of-Sex-lethal, isoform DImported
Gene namesi
Name:ssxImported
Synonyms:EG:132E8.1Imported
ORF Names:CG3056Imported, Dmel_CG3056Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0024987. ssx.

Expressioni

Gene expression databases

BgeeiFBgn0024987.

Interactioni

Protein-protein interaction databases

MINTiMINT-315293.
STRINGi7227.FBpp0089110.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini93 – 171RRM (RNA recognition motif)InterPro annotationAdd BLAST79
Domaini179 – 259RRM (RNA recognition motif)InterPro annotationAdd BLAST81

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiENOG410IQXB. Eukaryota.
ENOG411112S. LUCA.
GeneTreeiENSGT00760000118913.
OMAiNHHNPHM.
OrthoDBiEOG091G0G9L.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR002343. Hud_Sxl_RNA.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
PRINTSiPR00961. HUDSXLRNA.
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O76876-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNADKMQDQ EHDDEQSSDI EGSGDNVGRD DGTDDDDDSN GNMQQENGDG
60 70 80 90 100
GNGGDGQEHS GDEEQHHSQD NEGNDNSAGQ QQQMQQVDRT SATNLIINYL
110 120 130 140 150
PQDMTDRELY NLFSGCGPIN TCKIMRDFKT GYSFGYGFVD YKTESDSEDA
160 170 180 190 200
IQKLNGFYVR NKRLKVSYAR PGGQSIKDTN LYVINLSRNI NDDMLDRIFS
210 220 230 240 250
PYGLIVQRNI LRDKLTGRPR GVAFVRYNKR EEAQEAIKAL NNTVPEGGSQ
260 270 280 290 300
PIWVRLAEEH GKAKAAQFMA QIGGGNGGGG GGPPHMGPGG PMHPPHHHNN
310 320 330 340 350
HHHNNHHNPH MPPHHHQPQH PHQHPQHHPQ LHHMQHHHPN NHNNNHPNNH
360 370 380 390 400
HHNNNNNNHH NMGGPHPHHM QQMHPMGMNM GMGVNMGMGM GMGMPIHGGG
410 420 430 440 450
GGGGGGGGGG GGGNFHHMAH RGEVFMLPLP ICSRFPSQPH PVGNGICHSP
460 470 480
NKNSRFRLSR RPQASRTTIR YIAHSVADPV PTPTT
Length:485
Mass (Da):53,395
Last modified:November 1, 1998 - v1
Checksum:i18CF01939A11B06E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF45613.1.
AL023893 Genomic DNA. Translation: CAA19655.1.
RefSeqiNP_569908.1. NM_130552.3.
UniGeneiDm.14946.

Genome annotation databases

EnsemblMetazoaiFBtr0339773; FBpp0308820; FBgn0024987.
GeneIDi31086.
UCSCiCG3056-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF45613.1.
AL023893 Genomic DNA. Translation: CAA19655.1.
RefSeqiNP_569908.1. NM_130552.3.
UniGeneiDm.14946.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-315293.
STRINGi7227.FBpp0089110.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0339773; FBpp0308820; FBgn0024987.
GeneIDi31086.
UCSCiCG3056-RA. d. melanogaster.

Organism-specific databases

CTDi31086.
FlyBaseiFBgn0024987. ssx.

Phylogenomic databases

eggNOGiENOG410IQXB. Eukaryota.
ENOG411112S. LUCA.
GeneTreeiENSGT00760000118913.
OMAiNHHNPHM.
OrthoDBiEOG091G0G9L.

Miscellaneous databases

GenomeRNAii31086.

Gene expression databases

BgeeiFBgn0024987.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR002343. Hud_Sxl_RNA.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
PRINTSiPR00961. HUDSXLRNA.
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO76876_DROME
AccessioniPrimary (citable) accession number: O76876
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 142 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.