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Protein
Submitted name:

Beta GALactosidase homolog

Gene

bgal-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

ReactomeiR-CEL-1660662. Glycosphingolipid metabolism.
R-CEL-2022857. Keratan sulfate degradation.
R-CEL-2024096. HS-GAG degradation.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta GALactosidase homologImported
Gene namesi
Name:bgal-2Imported
ORF Names:CELE_H22K11.2Imported, H22K11.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiH22K11.2; CE47186; WBGene00019225; bgal-2.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 642623Sequence analysisPRO_5004159786Add
BLAST

Proteomic databases

EPDiO76632.
PaxDbiO76632.
PRIDEiO76632.

Interactioni

Protein-protein interaction databases

STRINGi6239.H22K11.2.

Structurei

3D structure databases

ProteinModelPortaliO76632.
SMRiO76632. Positions 26-639.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 355322Glyco_hydro_35InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 35 family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
GeneTreeiENSGT00390000006586.
HOGENOMiHOG000221607.
InParanoidiO76632.
OMAiLIRNTKI.
OrthoDBiEOG7GXPCD.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PIRSFiPIRSF006336. B-gal. 1 hit.
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

O76632-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRELALFLV CSVFATVFGT DSSPSFKIDT VNSQFLLDGD PFTYIAGEIH
60 70 80 90 100
YFRIPHQKWD DRLKRVRALG FNAITVPVPW NLHQFYQDET PILSGNLDLV
110 120 130 140 150
KFIKAAESNG LYTILRIGPY ISAEWDNGGL PWWLIRNTKI GKYRSSDPSF
160 170 180 190 200
MTEVTQWWKH LLPKIYPLMR KNAGPVLMVQ IEHFYGALGI CDQQYLLQLA
210 220 230 240 250
NMAKENLGND VVLFTVNPPV LQFMRCGTLP NILPTIEIVP NANAGEIESW
260 270 280 290 300
FSMQKAFMQG APAVASQFLI NPFKLWGKNV SDPYPNNLII QTAKTAFALN
310 320 330 340 350
ASLSFHMTHG GTNFGYWNGA VDPYPVTTSY DSFAPISEAG DVNPLYISIR
360 370 380 390 400
NWISNIPGWQ NPPTPIPANL PRTAYPDVQL TVFDTISGFI IGANPECWSS
410 420 430 440 450
PETPRTAEYI RQGYGYIYYN TTIIECGSLY IPTFADNAYI FLNQNFVGAL
460 470 480 490 500
YKQFGSIHNN TIDVQGCLDQ FNSLEIIIEI TGRDHNNYPV MSRGIQGNVY
510 520 530 540 550
MRNITLENWE SCEVPIETYE ISLVKNYESL KQHVFETIDF EKSQSAAIEQ
560 570 580 590 600
PSVFIGNLII KTAPADTFLD TRGWGKGVVT INQYNIGRYW ASIGPQQTLY
610 620 630 640
IPSEFLHKGE NLIMFYEFEG ATTACTATAC TAKFTNIPVF DY
Length:642
Mass (Da):72,490
Last modified:May 16, 2012 - v4
Checksum:iAACA3C657336F23E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD72416.2.
RefSeqiNP_509140.2. NM_076739.5.
UniGeneiCel.781.

Genome annotation databases

EnsemblMetazoaiH22K11.2; H22K11.2; WBGene00019225.
GeneIDi180945.
KEGGicel:CELE_H22K11.2.
UCSCiH22K11.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD72416.2.
RefSeqiNP_509140.2. NM_076739.5.
UniGeneiCel.781.

3D structure databases

ProteinModelPortaliO76632.
SMRiO76632. Positions 26-639.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.H22K11.2.

Proteomic databases

EPDiO76632.
PaxDbiO76632.
PRIDEiO76632.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiH22K11.2; H22K11.2; WBGene00019225.
GeneIDi180945.
KEGGicel:CELE_H22K11.2.
UCSCiH22K11.2. c. elegans.

Organism-specific databases

CTDi180945.
WormBaseiH22K11.2; CE47186; WBGene00019225; bgal-2.

Phylogenomic databases

eggNOGiKOG0496. Eukaryota.
COG1874. LUCA.
GeneTreeiENSGT00390000006586.
HOGENOMiHOG000221607.
InParanoidiO76632.
OMAiLIRNTKI.
OrthoDBiEOG7GXPCD.

Enzyme and pathway databases

ReactomeiR-CEL-1660662. Glycosphingolipid metabolism.
R-CEL-2022857. Keratan sulfate degradation.
R-CEL-2024096. HS-GAG degradation.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR031330. Gly_Hdrlase_35_cat.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR23421. PTHR23421. 1 hit.
PfamiPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PIRSFiPIRSF006336. B-gal. 1 hit.
PRINTSiPR00742. GLHYDRLASE35.
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiO76632_CAEEL
AccessioniPrimary (citable) accession number: O76632
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: May 16, 2012
Last modified: June 8, 2016
This is version 115 of the entry and version 4 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.