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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F13C5.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F13C5.2Imported, F13C5.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF13C5.2; CE19384; WBGene00017423.

PTM / Processingi

Proteomic databases

EPDiO76561.
PaxDbiO76561.
PeptideAtlasiO76561.

Expressioni

Gene expression databases

BgeeiWBGene00017423.

Interactioni

Protein-protein interaction databases

STRINGi6239.F13C5.2.1.

Structurei

3D structure databases

ProteinModelPortaliO76561.
SMRiO76561.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 205BromoInterPro annotationAdd BLAST73

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili242 – 266Sequence analysisAdd BLAST25

Keywords - Domaini

BromodomainSAAS annotation, Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1474. Eukaryota.
COG5076. LUCA.
GeneTreeiENSGT00760000119206.
HOGENOMiHOG000018488.
InParanoidiO76561.
OMAiSHAADST.
OrthoDBiEOG091G0XD9.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O76561-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTTRSANHP APKRAISPDS DDGEEDDFKS KRTPSGRGRG GRGRGRGRGR
60 70 80 90 100
GGATAAGATV EGGESTRGGG TGRGGRGRPR GSKNSDGGAG GPPAKRGRKK
110 120 130 140 150
KAKSESEDEA ESDHLHDELK KCLSILKEFE KSTHDSFTFP FRKPVDVVLL
160 170 180 190 200
GLTDYHEVIK KPMDMSTIRK KLIGEEYDTA VEFKEDFKLM INNCLTYNNE
210 220 230 240 250
GDPVADFALQ FRKKFAAKWK KEFPEDGDSF GQEKGEKEGS DNEDDEEEVD
260 270 280 290 300
EKEKEEEVKE DNAEEKPAEE PEQPDEKEEE DHEDEREEQE EEDSSDEEDG
310 320 330 340 350
LDDDDVRRHI PASTSAPVAK HPEAAMPEPA AEHSSIQSSE AQALGEISGA
360 370
HPIHIGESEI AGHAADSTTG ESHA
Length:374
Mass (Da):40,881
Last modified:November 1, 1998 - v1
Checksum:i8BB83D09FBBBD6A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD69431.1.
PIRiT33328.
RefSeqiNP_508124.1. NM_075723.4.
UniGeneiCel.6728.

Genome annotation databases

EnsemblMetazoaiF13C5.2; F13C5.2; WBGene00017423.
GeneIDi180410.
KEGGicel:CELE_F13C5.2.
UCSCiF13C5.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD69431.1.
PIRiT33328.
RefSeqiNP_508124.1. NM_075723.4.
UniGeneiCel.6728.

3D structure databases

ProteinModelPortaliO76561.
SMRiO76561.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F13C5.2.1.

Proteomic databases

EPDiO76561.
PaxDbiO76561.
PeptideAtlasiO76561.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF13C5.2; F13C5.2; WBGene00017423.
GeneIDi180410.
KEGGicel:CELE_F13C5.2.
UCSCiF13C5.2. c. elegans.

Organism-specific databases

CTDi180410.
WormBaseiF13C5.2; CE19384; WBGene00017423.

Phylogenomic databases

eggNOGiKOG1474. Eukaryota.
COG5076. LUCA.
GeneTreeiENSGT00760000119206.
HOGENOMiHOG000018488.
InParanoidiO76561.
OMAiSHAADST.
OrthoDBiEOG091G0XD9.

Gene expression databases

BgeeiWBGene00017423.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiIPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
[Graphical view]
PfamiPF00439. Bromodomain. 1 hit.
[Graphical view]
PRINTSiPR00503. BROMODOMAIN.
SMARTiSM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO76561_CAEEL
AccessioniPrimary (citable) accession number: O76561
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 2, 2016
This is version 114 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.