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Protein

Ras-related protein Rab-1C

Gene

Rab1C

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi40 – 48GTPBy similarity9
Nucleotide bindingi58 – 65GTPBy similarity8
Nucleotide bindingi88 – 92GTPBy similarity5
Nucleotide bindingi146 – 149GTPBy similarity4
Nucleotide bindingi176 – 178GTPBy similarity3

GO - Molecular functioni

Keywordsi

LigandGTP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ras-related protein Rab-1C
Gene namesi
Name:Rab1C
ORF Names:DDB_G0269174
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyostelidsDictyostelialesDictyosteliaceaeDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 1, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0269174 rab1C

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedSequence analysis
ChainiPRO_00003327482 – 201Ras-related protein Rab-1CAdd BLAST200

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi2N-myristoyl glycineSequence analysis1
Lipidationi3S-palmitoyl cysteineSequence analysis1

Post-translational modificationi

Although this sequence lacks the C-terminal cysteine motifs subject to isoprenylation in other Rab proteins, it does have N-terminal myristoylation and S-palmitoylation sequence motifs.

Keywords - PTMi

Lipoprotein, Myristate, Palmitate

Proteomic databases

PaxDbiO76173
PRIDEiO76173

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB0191203

Structurei

3D structure databases

ProteinModelPortaliO76173
SMRiO76173
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi62 – 70Effector regionBy similarity9

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.Curated

Phylogenomic databases

eggNOGiKOG0084 Eukaryota
ENOG410XQN5 LUCA
InParanoidiO76173
KOiK07874
OMAiFCIRTIE
PhylomeDBiO76173

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
PROSITEiView protein in PROSITE
PS51419 RAB, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O76173-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCSPSKEGN GSFSSTSTSF IHGSESHPEY DMLLKILVIG DSGVGKSCML
60 70 80 90 100
LRFADNRFTD SYISTIGVDF CIRTIELDGK KIKLQIWDTA GQERFKTITT
110 120 130 140 150
SYYRGAHGLI IVYDITSMDS FNSIKRWLID VDRFASPSVL KLIVGNKCDL
160 170 180 190 200
NSKRAVDFKI AKKFADELNI PIMETSAKES TAIDEAFIKL ASDIKKSTPQ

K
Length:201
Mass (Da):22,343
Last modified:November 1, 1998 - v1
Checksum:i881FC10CC7DCA4D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB015237 mRNA Translation: BAA31150.1
AAFI02000005 Genomic DNA Translation: EAL71937.1
RefSeqiXP_646027.1, XM_640935.1

Genome annotation databases

EnsemblProtistsiEAL71937; EAL71937; DDB_G0269174
GeneIDi8616975
KEGGiddi:DDB_G0269174

Similar proteinsi

Entry informationi

Entry nameiRAB1C_DICDI
AccessioniPrimary (citable) accession number: O76173
Secondary accession number(s): Q55DV4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: November 1, 1998
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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