O75937 (DNJC8_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 83.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: DnaJ homolog subfamily C member 8 Alternative name(s): Splicing protein spf31 | ||||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 253 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Contains 1 J domain. |
| Sequence caution | The sequence AAC35352.1 differs from that shown. Reason: Erroneous initiation. The sequence CAG33181.1 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Chaperone |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | nuclear mRNA splicing, via spliceosome Traceable author statement. Source: Reactome protein foldingInferred from electronic annotation. Source: InterPro |
| Cellular component | nucleoplasm Traceable author statement. Source: Reactome |
| Molecular function | heat shock protein binding Inferred from electronic annotation. Source: InterPro unfolded protein bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed | ||||||
| Chain | 2 – 253 | 252 | DnaJ homolog subfamily C member 8 | PRO_0000071060 | |||||
Regions | |||||||||
| Domain | 57 – 124 | 68 | J | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylalanine Ref.9 | ||||||
| Modified residue | 146 | 1 | N6-acetyllysine Ref.10 | ||||||
| Modified residue | 215 | 1 | Phosphoserine Ref.8 | ||||||
Experimental info | |||||||||
| Sequence conflict | 253 | 1 | E → D in CAG33181. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "spf31: a protein involved in splicing." King A., Ajuh P., Schrotz-King P., Lamond A., Mann M. Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Uterus. |
| [7] | "Human partial CDS from CD34+ stem cells." Ye M., Zhang Q.-H., Zhou J., Shen Y., Wu X.-Y., Guan Z.Q., Wang L., Fan H.-Y., Mao Y.-F., Dai M., Huang Q.-H., Chen S.-J., Chen Z. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 96-253. Tissue: Umbilical cord blood. |
| [8] | "Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry." Molina H., Horn D.M., Tang N., Mathivanan S., Pandey A. Proc. Natl. Acad. Sci. U.S.A. 104:2199-2204(2007) [PubMed: 17287340] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-215, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [9] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [10] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-146, MASS SPECTROMETRY. |
| [11] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF083190 mRNA. Translation: AAC35352.1. Different initiation. CR456900 mRNA. Translation: CAG33181.1. Different initiation. AK300797 mRNA. Translation: BAG62456.1. AL353354, AL353622 Genomic DNA. Translation: CAI20826.1. AL353622, AL353354 Genomic DNA. Translation: CAI19135.1. CH471059 Genomic DNA. Translation: EAX07707.1. CH471059 Genomic DNA. Translation: EAX07710.1. BC033159 mRNA. Translation: AAH33159.1. AF161433 mRNA. Translation: AAF28993.1. AF161449 mRNA. Translation: AAF29009.1. |
| IPI | IPI00003438. |
| RefSeq | NP_055095.2. NM_014280.2. |
| UniGene | Hs.433540. |
3D structure databases | |
| ProteinModelPortal | O75937. |
| SMR | O75937. Positions 55-124. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O75937. 3 interactions. |
| MINT | MINT-3002069. |
| STRING | O75937. |
PTM databases | |
| PhosphoSite | O75937. |
Proteomic databases | |
| PRIDE | O75937. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000263697; ENSP00000263697; ENSG00000126698. |
| GeneID | 22826. |
| KEGG | hsa:22826. |
| UCSC | uc001bpn.1. human. |
Organism-specific databases | |
| CTD | 22826. |
| GeneCards | GC01M028526. |
| H-InvDB | HIX0000296. |
| HGNC | HGNC:15470. DNAJC8. |
| HPA | HPA026283. |
| neXtProt | NX_O75937. |
| PharmGKB | PA27425. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG09854. |
| GeneTree | ENSGT00390000012569. |
| HOGENOM | HBG736819. |
| HOVERGEN | HBG051377. |
| InParanoid | O75937. |
| OMA | TYFNLNP. |
| OrthoDB | EOG4QC168. |
| PhylomeDB | O75937. |
Enzyme and pathway databases | |
| Reactome | REACT_1675. mRNA Processing. REACT_71. Gene Expression. |
Gene expression databases | |
| Bgee | O75937. |
| CleanEx | HS_DNAJC8. |
| Genevestigator | O75937. |
| GermOnline | ENSG00000126698. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001623. DnaJ_N. IPR003095. Hsp_DnaJ. [Graphical view] |
| Gene3D | G3DSA:1.10.287.110. DnaJ_N. 1 hit. |
| KO | K09528. |
| Pfam | PF00226. DnaJ. 1 hit. [Graphical view] |
| PRINTS | PR00625. JDOMAIN. |
| SMART | SM00271. DnaJ. 1 hit. [Graphical view] |
| SUPFAM | SSF46565. DnaJ_N. 1 hit. |
| PROSITE | PS00636. DNAJ_1. False negative. PS50076. DNAJ_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 43232. |
Entry information
| Entry name | DNJC8_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O75937 Secondary accession number(s): B4DUU4 Q9P067 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| SIMILARITY comments Index of protein domains and families |

Clusters with