O75410 (TACC1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 109.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Transforming acidic coiled-coil-containing protein 1 Alternative name(s): Gastric cancer antigen Ga55 Taxin-1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 805 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Likely involved in the processes that promote cell division prior to the formation of differentiated tissues. |
| Subunit structure | Interacts with KIAA0097/CH-TOG and with the oncogenic transcription factor YEATS4. Interacts with AURKA, AURKB and AURKC. Interacts with LSM7, TDRD7 and SNRPG. Interacts with GCN5L2 and PCAF. Ref.11 Ref.12 Ref.13 Ref.14 Ref.15 Ref.19 |
| Subcellular location | Cytoplasm. Nucleus. Cytoplasm › cytoskeleton › centrosome. Note: Nucleus during interphase. Weakly concentrated at centrosomes during mitosis and colocalizes with AURKC at the midbody during cytokinesis. Ref.14 Ref.19 |
| Tissue specificity | Isoform 1, isoform 3 and isoform 5 are ubiquitous. Isoform 2 is strongly expressed in the brain, weakly detectable in lung and colon, and overexpressed in gastric cancer. Isoform 4 is not detected in normal tissues, but strong expression was found in gastric cancer tissues. Down-regulated in a subset of cases of breast cancer. Ref.9 Ref.12 |
| Developmental stage | Expressed at high level during early embryogenesis. |
| Post-translational modification | Isoform 1 is heavily phosphorylated; isoform 6 is not. Phosphorylated upon DNA damage, probably by ATM or ATR. Ref.12 Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 |
| Sequence similarities | Belongs to the TACC family. Contains 2 SPAZ (Ser/Pro-rich AZU-1) domains. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell cycle Cell division |
| Cellular component | Cytoplasm Cytoskeleton Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil Repeat |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cell cycle Inferred from electronic annotation. Source: UniProtKB-KW cell divisionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | intermediate filament cytoskeleton Inferred from direct assay. Source: HPA microtubule organizing centerInferred from electronic annotation. Source: UniProtKB-SubCell nucleusInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | protein binding Inferred from physical interaction Ref.11Ref.12Ref.13Ref.15. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| AURKB | Q96GD4 | 2 | EBI-624278,EBI-624291 | |
| CKAP5 | Q14008 | 3 | EBI-624237,EBI-310585 | |
| LSM7 | Q9UK45 | 4 | EBI-624252,EBI-348372 | |
| SNRPG | P62308 | 5 | EBI-624252,EBI-624585 | |
| TDRD7 | Q8NHU6 | 4 | EBI-624237,EBI-624505 | |
| YEATS4 | O95619 | 6 | EBI-624237,EBI-399269 |
Alternative products
| This entry describes 8 isoforms produced by alternative splicing. [Align] [Select] Note: Additional isoforms seem to exist. | ||||||
| Isoform 1 (identifier: O75410-1) Also known as: A; Long; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O75410-2) Also known as: F; The sequence of this isoform differs from the canonical sequence as follows: 464-464: T → TTTEQVKFLCFLL | ||||||
| Isoform 3 (identifier: O75410-3) Also known as: E; The sequence of this isoform differs from the canonical sequence as follows: 1-195: Missing. | ||||||
| Isoform 4 (identifier: O75410-4) Also known as: D; The sequence of this isoform differs from the canonical sequence as follows: 1-426: Missing. 427-464: DPFKPTTTLT...PKKAKSRLIT → MGGSHSQTPR...EQVKFLCFLL | ||||||
| Isoform 5 (identifier: O75410-5) Also known as: C; The sequence of this isoform differs from the canonical sequence as follows: 1-438: Missing. 439-464: DFCSPTGNHVNEILESPKKAKSRLIT → MGGSHSQTPRGREPAGERHPRPTETA | ||||||
| Isoform 6 (identifier: O75410-6) Also known as: Short; The sequence of this isoform differs from the canonical sequence as follows: 54-54: S → R 55-464: Missing. | ||||||
| Isoform 7 (identifier: O75410-7) The sequence of this isoform differs from the canonical sequence as follows: 1-41: Missing. 42-53: EDSQAETKSLSF → MNNILKLK 525-553: Missing. | ||||||
| Isoform 8 (identifier: O75410-8) The sequence of this isoform differs from the canonical sequence as follows: 1-651: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 805 | 805 | Transforming acidic coiled-coil-containing protein 1 | PRO_0000179986 | |||||
Regions | |||||||||
| Domain | 215 – 297 | 83 | SPAZ 1 | ||||||
| Domain | 359 – 507 | 149 | SPAZ 2 | ||||||
| Region | 1 – 55 | 55 | Interaction with LSM7 and SNRPG | ||||||
| Region | 152 – 259 | 108 | Interaction with TDRD7 | ||||||
| Region | 206 – 427 | 222 | Interaction with YEATS4 | ||||||
| Region | 701 – 805 | 105 | Interaction with CH-TOG | ||||||
| Coiled coil | 610 – 805 | 196 | |||||||
| Motif | 226 – 241 | 16 | Bipartite nuclear localization signal 1 Potential | ||||||
| Motif | 455 – 471 | 17 | Bipartite nuclear localization signal 2 Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 44 | 1 | Phosphoserine Ref.18 | ||||||
| Modified residue | 50 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 52 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 54 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 55 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 57 | 1 | Phosphoserine Ref.17 | ||||||
| Modified residue | 228 | 1 | Phosphoserine; by AURKC Ref.19 | ||||||
| Modified residue | 276 | 1 | Phosphoserine Ref.20 | ||||||
| Modified residue | 406 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 533 | 1 | Phosphotyrosine Ref.16 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 651 | 651 | Missing in isoform 8. | VSP_012640 | |||||
| Alternative sequence | 1 – 438 | 438 | Missing in isoform 5. | VSP_012639 | |||||
| Alternative sequence | 1 – 426 | 426 | Missing in isoform 4. | VSP_012641 | |||||
| Alternative sequence | 1 – 195 | 195 | Missing in isoform 3. | VSP_012638 | |||||
| Alternative sequence | 1 – 41 | 41 | Missing in isoform 7. | VSP_012637 | |||||
| Alternative sequence | 42 – 53 | 12 | EDSQA…KSLSF → MNNILKLK in isoform 7. | VSP_012643 | |||||
| Alternative sequence | 54 | 1 | S → R in isoform 6. | VSP_012644 | |||||
| Alternative sequence | 55 – 464 | 410 | Missing in isoform 6. | VSP_012645 | |||||
| Alternative sequence | 427 – 464 | 38 | DPFKP…SRLIT → MGGSHSQTPRGREPAGERHP RPTETATTEQVKFLCFLL in isoform 4. | VSP_012642 | |||||
| Alternative sequence | 439 – 464 | 26 | DFCSP…SRLIT → MGGSHSQTPRGREPAGERHP RPTETA in isoform 5. | VSP_012646 | |||||
| Alternative sequence | 464 | 1 | T → TTTEQVKFLCFLL in isoform 2. | VSP_012647 | |||||
| Alternative sequence | 525 – 553 | 29 | Missing in isoform 7. | VSP_012648 | |||||
| Natural variant | 187 | 1 | P → L. Corresponds to variant rs34235313 [ dbSNP | Ensembl ]. | VAR_053703 | |||||
| Natural variant | 243 | 1 | I → T. Corresponds to variant rs6980553 [ dbSNP | Ensembl ]. | VAR_053704 | |||||
| Natural variant | 255 | 1 | E → G. Corresponds to variant rs10107016 [ dbSNP | Ensembl ]. | VAR_053705 | |||||
Experimental info | |||||||||
| Mutagenesis | 228 | 1 | S → A: Impairs phosphorylation by AURKC. Ref.19 | ||||||
| Sequence conflict | 291 | 1 | L → I in AAC32327. Ref.1 | ||||||
| Sequence conflict | 428 | 1 | P → H in AAH41391. Ref.6 | ||||||
| Sequence conflict | 588 | 1 | G → V in BAA83055. Ref.7 | ||||||
| Sequence conflict | 654 | 1 | Missing in BAA83055. Ref.7 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning of TACC1, an embryonically expressed, potentially transforming coiled coil containing gene, from the 8p11 breast cancer amplicon." Still I.H., Hamilton M., Vince P., Wolfman A., Cowell J.K. Oncogene 18:4032-4038(1999) [PubMed: 10435627] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [2] | "Structure-function evolution of the transforming acidic coiled coil genes revealed by analysis of phylogenetically diverse organisms." Still I.H., Vettaikkorumakankauv A.K., DiMatteo A., Liang P. BMC Evol. Biol. 4:16-16(2004) [PubMed: 15207008] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 6). |
| [3] | "Cloning of a novel human gene similar to TACC1." Li F., Yao K.T. Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 8). |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Testis. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 7). Tissue: Brain. |
| [7] | "Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Kikuno R., Nagase T., Ishikawa K., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 6:197-205(1999) [PubMed: 10470851] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 364-805 (ISOFORM 2). Tissue: Brain. |
| [8] | "Serological identification and expression analysis of gastric cancer-associated genes." Line A., Stengrevics A., Slucka Z., Li G., Jankevics E., Rees R.C. Br. J. Cancer 86:1824-1830(2002) [PubMed: 12087473] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 450-805 (ISOFORM 2). Tissue: Gastric adenocarcinoma. |
| [9] | "Altered splicing pattern of TACC1 mRNA in gastric cancer." Line A., Slucka Z., Stengrevics A., Li G., Rees R.C. Cancer Genet. Cytogenet. 139:78-83(2002) [PubMed: 12547166] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-543 (ISOFORM 3), NUCLEOTIDE SEQUENCE OF 1-571 (ISOFORMS 4 AND 5), TISSUE SPECIFICITY. Tissue: Stomach cancer. |
| [10] | "The TACC domain identifies a family of centrosomal proteins that can interact with microtubules." Gergely F., Karlsson C., Still I.H., Cowell J.K., Kilmartin J., Raff J.W. Proc. Natl. Acad. Sci. U.S.A. 97:14352-14357(2000) [PubMed: 11121038] [Abstract] Cited for: CHARACTERIZATION. Tissue: Brain, Fetal brain and Skeletal muscle. |
| [11] | "Interaction of the transforming acidic coiled-coil 1 (TACC1) protein with ch-TOG and GAS41/NuBI1 suggests multiple TACC1-containing protein complexes in human cells." Lauffart B., Howell S.J., Tasch J.E., Cowell J.K., Still I.H. Biochem. J. 363:195-200(2002) [PubMed: 11903063] [Abstract] Cited for: INTERACTION WITH KIAA0097 AND YEATS4. |
| [12] | "Carcinogenesis and translational controls: TACC1 is down-regulated in human cancers and associates with mRNA regulators." Conte N., Charafe-Jauffret E., Delaval B., Adelaide J., Ginestier C., Geneix J., Isnardon D., Jacquemier J., Birnbaum D. Oncogene 21:5619-5630(2002) [PubMed: 12165861] [Abstract] Cited for: INTERACTION WITH LSM7 AND SNRPG, TISSUE SPECIFICITY, PHOSPHORYLATION. |
| [13] | "TACC1-chTOG-Aurora A protein complex in breast cancer." Conte N., Delaval B., Ginestier C., Ferrand A., Isnardon D., Larroque C., Prigent C., Seraphin B., Jacquemier J., Birnbaum D. Oncogene 22:8102-8116(2003) [PubMed: 14603251] [Abstract] Cited for: INTERACTION WITH KIAA0097; LSM7; TDRD7 AND AURKA. |
| [14] | "The transforming acidic coiled coil proteins interact with nuclear histone acetyltransferases." Gangisetty O., Lauffart B., Sondarva G.V., Chelsea D.M., Still I.H. Oncogene 23:2559-2563(2004) [PubMed: 14767476] [Abstract] Cited for: INTERACTION WITH GCN5L2 AND PCAF, SUBCELLULAR LOCATION. |
| [15] | "Aurora B -TACC1 protein complex in cytokinesis." Delaval B., Ferrand A., Conte N., Larroque C., Hernandez-Verdun D., Prigent C., Birnbaum D. Oncogene 23:4516-4522(2004) [PubMed: 15064709] [Abstract] Cited for: INTERACTION WITH AURKB. |
| [16] | "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells." Rush J., Moritz A., Lee K.A., Guo A., Goss V.L., Spek E.J., Zhang H., Zha X.-M., Polakiewicz R.D., Comb M.J. Nat. Biotechnol. 23:94-101(2005) [PubMed: 15592455] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-533, MASS SPECTROMETRY. |
| [17] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50; SER-52; SER-54; SER-55 AND SER-57, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [18] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed: 17525332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-44, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [19] | "Aurora-C interacts with and phosphorylates the transforming acidic coiled-coil 1 protein." Gabillard J.C., Ulisse S., Baldini E., Sorrenti S., Cremet J.Y., Coccaro C., Prigent C., D'Armiento M., Arlot-Bonnemains Y. Biochem. Biophys. Res. Commun. 408:647-653(2011) [PubMed: 21531210] [Abstract] Cited for: SUBCELLULAR LOCATION, INTERACTION WITH AURKC, PHOSPHORYLATION AT SER-228 BY AURKC, MUTAGENESIS OF SER-228. |
| [20] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-276, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF049910 mRNA. Translation: AAC32327.1. AY177411 mRNA. Translation: AAO53446.1. AY139007 mRNA. Translation: AAN28955.1. AK314620 mRNA. Translation: BAG37186.1. CH471080 Genomic DNA. Translation: EAW63293.1. CH471080 Genomic DNA. Translation: EAW63296.1. CH471080 Genomic DNA. Translation: EAW63298.1. BC041391 mRNA. Translation: AAH41391.1. AB029026 mRNA. Translation: BAA83055.1. AY039239 mRNA. Translation: AAK68658.1. AY072874 mRNA. Translation: AAL62461.1. AY072875 mRNA. Translation: AAL62462.1. AY072876 mRNA. Translation: AAL62463.2. |
| IPI | IPI00025683. IPI00216765. IPI00332794. IPI00428263. IPI00549229. IPI00550248. IPI00550465. IPI00550627. |
| RefSeq | NP_001116296.1. NM_001122824.1. NP_001139688.1. NM_001146216.2. NP_006274.2. NM_006283.2. |
| UniGene | Hs.279245. |
3D structure databases | |
| ProteinModelPortal | O75410. |
| SMR | O75410. Positions 612-639, 756-792. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O75410. 20 interactions. |
| STRING | O75410. |
PTM databases | |
| PhosphoSite | O75410. |
Proteomic databases | |
| PRIDE | O75410. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000317827; ENSP00000321703; ENSG00000147526. |
| GeneID | 6867. |
| KEGG | hsa:6867. |
| NMPDR | fig|9606.3.peg.30215. |
| UCSC | uc003xmb.2. human. uc003xmf.2. human. uc003xmh.2. human. uc010lwp.1. human. uc010lwq.1. human. |
Organism-specific databases | |
| CTD | 6867. |
| GeneCards | GC08P038586. |
| H-InvDB | HIX0007462. |
| HGNC | HGNC:11522. TACC1. |
| HPA | CAB017041. HPA024702. |
| MIM | 605301. gene. |
| neXtProt | NX_O75410. |
| PharmGKB | PA36299. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG14643. |
| GeneTree | ENSGT00530000063855. |
| HOVERGEN | HBG105967. |
| OMA | SSDTNDS. |
| PhylomeDB | O75410. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | aurora_a_pathway. Aurora A signaling. aurora_b_pathway. Aurora B signaling. |
Gene expression databases | |
| ArrayExpress | O75410. |
| Bgee | O75410. |
| Genevestigator | O75410. |
| GermOnline | ENSG00000147526. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR007707. TACC. [Graphical view] |
| KO | K14281. |
| PANTHER | PTHR13924. TACC. 1 hit. |
| Pfam | PF05010. TACC. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 26803. |
| PMAP-CutDB | O75410. |
| SOURCE | Search... |
Entry information
| Entry name | TACC1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O75410 Secondary accession number(s): B2RBD9 Q9UPP9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 8 Human chromosome 8: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with