O75330 (HMMR_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 113.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Hyaluronan mediated motility receptor Alternative name(s): Intracellular hyaluronic acid-binding protein Receptor for hyaluronan-mediated motility CD_antigen=CD168 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 724 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Involved in cell motility. When hyaluronan binds to HMMR, the phosphorylation of a number of proteins, including PTK2/FAK1 occurs. May also be involved in cellular transformation and metastasis formation, and in regulating extracellular-regulated kinase (ERK) activity. |
| Subunit structure | Subunit of the HARC complex. |
| Subcellular location | Cell surface. Cytoplasm By similarity. |
| Tissue specificity | Expressed in breast cancer cell lines and in normal breast tissue. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Repeat |
| Ligand | Hyaluronic acid |
| PTM | Glycoprotein Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | carbohydrate metabolic process Traceable author statement. Source: Reactome hyaluronan catabolic processTraceable author statement. Source: Reactome small molecule metabolic processTraceable author statement. Source: Reactome |
| Cellular_component | cell surface Inferred from electronic annotation. Source: UniProtKB-SubCell cytoplasmInferred from electronic annotation. Source: UniProtKB-SubCell plasma membraneTraceable author statement. Source: Reactome |
| Molecular_function | hyaluronic acid binding Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O75330-1) Also known as: A; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O75330-2) Also known as: B; The sequence of this isoform differs from the canonical sequence as follows: 76-90: Missing. | ||||||
| Isoform 3 (identifier: O75330-3) The sequence of this isoform differs from the canonical sequence as follows: 75-75: K → KK | ||||||
| Isoform 4 (identifier: O75330-4) The sequence of this isoform differs from the canonical sequence as follows: 1-90: MSFPKAPLKR...DKDLKILEKE → MTLL |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 724 | 724 | Hyaluronan mediated motility receptor | PRO_0000084007 | |||||
Regions | |||||||||
| Region | 635 – 645 | 11 | Hyaluronic acid-binding Potential | ||||||
| Region | 657 – 666 | 10 | Hyaluronic acid-binding Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 20 | 1 | Phosphoserine Ref.7 | ||||||
| Glycosylation | 133 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 477 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 567 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 588 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 90 | 90 | MSFPK…ILEKE → MTLL in isoform 4. | VSP_041266 | |||||
| Alternative sequence | 75 | 1 | K → KK in isoform 3. | VSP_038378 | |||||
| Alternative sequence | 76 – 90 | 15 | Missing in isoform 2. | VSP_004286 | |||||
| Natural variant | 92 | 1 | R → C. Ref.6 Corresponds to variant rs299284 [ dbSNP | Ensembl ]. | VAR_024155 | |||||
| Natural variant | 305 | 1 | N → K. Corresponds to variant rs2303077 [ dbSNP | Ensembl ]. | VAR_031661 | |||||
| Natural variant | 320 | 1 | N → K. Corresponds to variant rs2303077 [ dbSNP | Ensembl ]. | VAR_056917 | |||||
| Natural variant | 332 | 1 | R → H. Corresponds to variant rs2303078 [ dbSNP | Ensembl ]. | VAR_024156 | |||||
| Natural variant | 368 | 1 | V → A. Ref.3 Ref.6 Corresponds to variant rs299290 [ dbSNP | Ensembl ]. | VAR_020044 | |||||
| Natural variant | 484 | 1 | A → V. Ref.3 Ref.6 Corresponds to variant rs299295 [ dbSNP | Ensembl ]. | VAR_024157 | |||||
| Natural variant | 557 | 1 | D → H. Corresponds to variant rs2230362 [ dbSNP | Ensembl ]. | VAR_056918 | |||||
| Natural variant | 595 | 1 | L → I. Corresponds to variant rs2230363 [ dbSNP | Ensembl ]. | VAR_056919 | |||||
Experimental info | |||||||||
| Sequence conflict | 103 | 1 | R → S in AAC32548. Ref.2 | ||||||
| Sequence conflict | 277 | 1 | E → D in AAC52049. Ref.1 | ||||||
| Sequence conflict | 298 | 1 | K → T in AAC52049. Ref.1 | ||||||
| Sequence conflict | 322 | 1 | K → E in AAC52049. Ref.1 | ||||||
| Sequence conflict | 330 – 332 | 3 | QER → REH in AAC52049. Ref.1 | ||||||
| Sequence conflict | 547 | 1 | Q → R in BAF83266. Ref.3 | ||||||
Sequences
| ||||||||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "The characterization of a human RHAMM cDNA: conservation of the hyaluronan-binding domains." Wang C., Entwistle J., Hou G., Li Q., Turley E.A. Gene 174:299-306(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3). Tissue: Mammary gland. |
| [2] | "The human hyaluronan receptor RHAMM is expressed as an intracellular protein in breast cancer cells." Assmann V., Marshall J.F., Fieber C., Hofmann M., Hart I.R. J. Cell Sci. 111:1685-1694(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), ALTERNATIVE SPLICING (ISOFORM 2), CHARACTERIZATION. Tissue: Mammary carcinoma. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 4), VARIANTS ALA-368 AND VAL-484. Tissue: Thymus. |
| [4] | "The DNA sequence and comparative analysis of human chromosome 5." Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S. Rubin E.M.Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANTS CYS-92; ALA-368 AND VAL-484. |
| [7] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-20, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U29343 mRNA. Translation: AAC52049.1. AF032862 mRNA. Translation: AAC32548.1. AK290577 mRNA. Translation: BAF83266.1. AK303616 mRNA. Translation: BAG64626.1. AC112205 Genomic DNA. No translation available. CH471062 Genomic DNA. Translation: EAW61522.1. CH471062 Genomic DNA. Translation: EAW61523.1. CH471062 Genomic DNA. Translation: EAW61524.1. CH471062 Genomic DNA. Translation: EAW61525.1. BC108904 mRNA. Translation: AAI08905.1. |
| IPI | IPI00337325. IPI00337772. IPI00844515. IPI00917607. |
| PIR | JC5016. |
| RefSeq | NP_001136028.1. NM_001142556.1. NP_001136029.1. NM_001142557.1. NP_036616.2. NM_012484.2. NP_036617.2. NM_012485.2. |
| UniGene | Hs.740467. |
3D structure databases | |
| ProteinModelPortal | O75330. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-56496N. |
| IntAct | O75330. 6 interactions. |
| STRING | 9606.ENSP00000377492. |
PTM databases | |
| PhosphoSite | O75330. |
2D gel databases | |
| REPRODUCTION-2DPAGE | O75330. |
Proteomic databases | |
| PaxDb | O75330. |
| PRIDE | O75330. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000353866; ENSP00000185942; ENSG00000072571. ENST00000358715; ENSP00000351554; ENSG00000072571. ENST00000393915; ENSP00000377492; ENSG00000072571. ENST00000432118; ENSP00000402673; ENSG00000072571. |
| GeneID | 3161. |
| KEGG | hsa:3161. |
| UCSC | uc003lzf.3. human. uc003lzg.3. human. uc003lzh.3. human. uc011dem.2. human. |
Organism-specific databases | |
| CTD | 3161. |
| GeneCards | GC05P162887. |
| H-InvDB | HIX0032412. |
| HGNC | HGNC:5012. HMMR. |
| HPA | CAB002433. |
| MIM | 600936. gene. |
| neXtProt | NX_O75330. |
| PharmGKB | PA29340. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG146600. |
| HOVERGEN | HBG044411. |
| KO | K06267. |
| OMA | KPFQLQL. |
| PhylomeDB | O75330. |
Enzyme and pathway databases | |
| Reactome | REACT_111217. Metabolism. REACT_116125. Disease. |
Gene expression databases | |
| ArrayExpress | O75330. |
| Bgee | O75330. |
| CleanEx | HS_HMMR. |
| Genevestigator | O75330. |
| GermOnline | ENSG00000072571. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR026203. IHABP. [Graphical view] |
| PANTHER | PTHR18956. PTHR18956. 1 hit. |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 3161. |
| NextBio | 12532. |
| SOURCE | Search... |
Entry information
| Entry name | HMMR_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O75330 Secondary accession number(s): A8K3G2 Q92767 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human cell differentiation molecules CD nomenclature of surface proteins of human leucocytes and list of entries |
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

Clusters with
