Reviewed,
UniProtKB/Swiss-Prot O75179 (ANR17_HUMAN)
Last modified
December 15, 2009.
Version 72.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin
| Protein names | Recommended name: Ankyrin repeat domain-containing protein 17 Alternative name(s): Gene trap ankyrin repeat protein Serologically defined breast cancer antigen NY-BR-16 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2603 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification By similarity. Target of enterovirus 71 which is the major etiological agent of HFMD (hand, foot and mouth disease). |
| Subunit structure | Interacts with VP1 capsid protein of enterovirus 71 (EV71). Ref.10 |
| Subcellular location | Cytoplasm. Nucleus. Note: Detected around the nucleolus. Ref.10 |
| Tissue specificity | Expressed in bone marrow. Ref.10 |
| Sequence similarities | Contains 25 ANK repeats. Contains 1 KH domain. |
| Sequence caution | The sequence AAG48253.1 differs from that shown. Reason: Frameshift at several positions. The sequence AAH04173.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. The sequence AAH04891.1 differs from that shown. Reason: Erroneous translation. The sequence AAH04891.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. The sequence BAB15260.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAB15260.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Host-virus interaction |
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Coiled coil Repeat |
| Ligand | RNA-binding |
| PTM | Phosphoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | interspecies interaction between organisms Inferred from electronic annotation. Source: UniProtKB-KW mismatch repairInferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell nucleusInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ATP binding Inferred from electronic annotation. Source: InterPro RNA bindingInferred from electronic annotation. Source: UniProtKB-KW mismatched DNA bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O75179-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O75179-2) The sequence of this isoform differs from the canonical sequence as follows: 1028-1028: Missing. | ||||||
| Isoform 3 (identifier: O75179-3) The sequence of this isoform differs from the canonical sequence as follows: 1176-1187: KEHRNVSDYTPL → YRSTGMVLITHL 1188-2603: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: O75179-4) The sequence of this isoform differs from the canonical sequence as follows: 982-1010: GVIVGQPVLGQAQLAGLGQGILTETQQGL → VLSSLLQPCFLSTLPLILMHRLRVIMTRR 1011-1603: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 5 (identifier: O75179-5) The sequence of this isoform differs from the canonical sequence as follows: 742-751: NRAPRVPVQA → TDNIFPRLVC 752-2603: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2603 | 2603 | Ankyrin repeat domain-containing protein 17 | PRO_0000307917 | |||||
Regions | |||||||||
| Repeat | 233 – 262 | 30 | ANK 1 | ||||||
| Repeat | 266 – 295 | 30 | ANK 2 | ||||||
| Repeat | 300 – 329 | 30 | ANK 3 | ||||||
| Repeat | 333 – 362 | 30 | ANK 4 | ||||||
| Repeat | 366 – 395 | 30 | ANK 5 | ||||||
| Repeat | 400 – 429 | 30 | ANK 6 | ||||||
| Repeat | 433 – 462 | 30 | ANK 7 | ||||||
| Repeat | 466 – 495 | 30 | ANK 8 | ||||||
| Repeat | 499 – 528 | 30 | ANK 9 | ||||||
| Repeat | 533 – 562 | 30 | ANK 10 | ||||||
| Repeat | 563 – 592 | 30 | ANK 11 | ||||||
| Repeat | 596 – 625 | 30 | ANK 12 | ||||||
| Repeat | 629 – 658 | 30 | ANK 13 | ||||||
| Repeat | 663 – 692 | 30 | ANK 14 | ||||||
| Repeat | 696 – 725 | 30 | ANK 15 | ||||||
| Repeat | 1082 – 1111 | 30 | ANK 16 | ||||||
| Repeat | 1115 – 1144 | 30 | ANK 17 | ||||||
| Repeat | 1149 – 1178 | 30 | ANK 18 | ||||||
| Repeat | 1182 – 1211 | 30 | ANK 19 | ||||||
| Repeat | 1217 – 1246 | 30 | ANK 20 | ||||||
| Repeat | 1251 – 1280 | 30 | ANK 21 | ||||||
| Repeat | 1284 – 1313 | 30 | ANK 22 | ||||||
| Repeat | 1319 – 1348 | 30 | ANK 23 | ||||||
| Repeat | 1352 – 1381 | 30 | ANK 24 | ||||||
| Repeat | 1385 – 1414 | 30 | ANK 25 | ||||||
| Domain | 1725 – 1789 | 65 | KH | ||||||
| Coiled coil | 1442 – 1526 | 85 | Potential | ||||||
| Compositional bias | 96 – 110 | 15 | Gly-rich | ||||||
| Compositional bias | 858 – 1008 | 151 | Gln-rich | ||||||
| Compositional bias | 1603 – 1700 | 98 | Ser-rich | ||||||
| Compositional bias | 1950 – 2106 | 157 | Ser-rich | ||||||
| Compositional bias | 1966 – 2033 | 68 | Thr-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 5 | 1 | Phosphothreonine | ||||||
| Modified residue | 19 | 1 | Phosphoserine | ||||||
| Modified residue | 803 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 1333 | 1 | Phosphotyrosine Ref.9 | ||||||
| Modified residue | 1457 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 1635 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1696 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 1700 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 1709 | 1 | Phosphoserine Ref.12 | ||||||
| Modified residue | 2042 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 2044 | 1 | Phosphoserine | ||||||
| Modified residue | 2045 | 1 | Phosphoserine Ref.12 Ref.11 | ||||||
| Modified residue | 2047 | 1 | Phosphoserine Ref.12 Ref.11 | ||||||
| Modified residue | 2059 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 2067 | 1 | Phosphoserine Ref.8 | ||||||
| Modified residue | 2401 | 1 | Phosphoserine Ref.12 | ||||||
Natural variations | |||||||||
| Alternative sequence | 742 – 751 | 10 | NRAPRVPVQA → TDNIFPRLVC in isoform 5. | VSP_028859 | |||||
| Alternative sequence | 752 – 2603 | 1852 | Missing in isoform 5. | VSP_028860 | |||||
| Alternative sequence | 982 – 1010 | 29 | GVIVG…TQQGL → VLSSLLQPCFLSTLPLILMH RLRVIMTRR in isoform 4. | VSP_028861 | |||||
| Alternative sequence | 1011 – 1603 | 593 | Missing in isoform 4. | VSP_028862 | |||||
| Alternative sequence | 1028 | 1 | Missing in isoform 2. | VSP_028863 | |||||
| Alternative sequence | 1176 – 1187 | 12 | KEHRN…DYTPL → YRSTGMVLITHL in isoform 3. | VSP_028864 | |||||
| Alternative sequence | 1188 – 2603 | 1416 | Missing in isoform 3. | VSP_028865 | |||||
| Natural variant | 2560 | 1 | H → Y: dbSNP rs2306059. | VAR_036711 | |||||
Experimental info | |||||||||
| Sequence conflict | 304 | 1 | P → S in BAA31672. Ref.4 | ||||||
| Sequence conflict | 705 | 1 | A → P in AAG48253. Ref.1 | ||||||
| Sequence conflict | 713 | 1 | V → G in AAG48253. Ref.1 | ||||||
| Sequence conflict | 1137 | 1 | D → G in BAB15260. Ref.7 | ||||||
| Sequence conflict | 1163 | 1 | Q → P in AAG48253. Ref.1 | ||||||
| Sequence conflict | 1391 | 1 | Missing in CAD38571. Ref.6 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Humoral immunity to human breast cancer: antigen definition and quantitative analysis of mRNA expression." Scanlan M.J., Gout I., Gordon C.M., Williamson B., Stockert E., Gure A.O., Jaeger D., Chen Y.-T., Mackay A., O'Hare M.J., Old L.J. Cancer Immun. 1:4-4(2001) [PubMed: 12747765] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 3). Tissue: Mammary gland. |
| [2] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed: 15815621] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 181-2603 (ISOFORM 4). Tissue: Lymph, Muscle, Placenta and Uterus. |
| [4] | "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro." Ishikawa K., Nagase T., Suyama M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:169-176(1998) [PubMed: 9734811] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 117-2603 (ISOFORM 2). Tissue: Brain. |
| [5] | "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones." Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T. DNA Res. 9:99-106(2002) [PubMed: 12168954] [Abstract] Cited for: SEQUENCE REVISION. |
| [6] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 705-1487 (ISOFORM 1). Tissue: Brain. |
| [7] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1035-1492 (ISOFORM 1). |
| [8] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-2059 AND SER-2067, MASS SPECTROMETRY. Tissue: Epithelium. |
| [9] | "Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer." Rikova K., Guo A., Zeng Q., Possemato A., Yu J., Haack H., Nardone J., Lee K., Reeves C., Li Y., Hu Y., Tan Z., Stokes M., Sullivan L., Mitchell J., Wetzel R., Macneill J., Ren J.M. Comb M.J.Cell 131:1190-1203(2007) [PubMed: 18083107] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-1333, MASS SPECTROMETRY. |
| [10] | "The VP1 structural protein of enterovirus 71 interacts with human ornithine decarboxylase and gene trap ankyrin repeat." Yeo W.M., Chow V.T.K. Microb. Pathog. 42:129-137(2007) [PubMed: 17276651] [Abstract] Cited for: FUNCTION, INTERACTION WITH VP1, TISSUE SPECIFICITY, SUBCELLULAR LOCATION. |
| [11] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed: 18220336] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-2042; SER-2045 AND SER-2047, MASS SPECTROMETRY. |
| [12] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-803; SER-1457; SER-1696; SER-1700; SER-1709; SER-2045; SER-2047 AND SER-2401, MASS SPECTROMETRY. |
| [13] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [14] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-5; SER-19; SER-1457; SER-1696; SER-1700; SER-1709; SER-2042; SER-2044; SER-2045; SER-2047 AND SER-2067, MASS SPECTROMETRY. |
| [15] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19; SER-1700; SER-1709; SER-2045; SER-2047 AND SER-2401, MASS SPECTROMETRY. Tissue: T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF308285 mRNA. Translation: AAG48253.1. Frameshift. AC053527 Genomic DNA. No translation available. AC095053 Genomic DNA. No translation available. AC105757 Genomic DNA. No translation available. BC004173 mRNA. Translation: AAH04173.1. Sequence problems. BC004891 mRNA. Translation: AAH04891.1. Sequence problems. BC007747 mRNA. Translation: AAH07747.2. BC019963 mRNA. Translation: AAH19963.1. BC043394 mRNA. Translation: AAH43394.1. AB014597 mRNA. Translation: BAA31672.2. AL831903 mRNA. Translation: CAD38571.2. AK025859 mRNA. Translation: BAB15260.1. Sequence problems. | |
| IPI | IPI00251783. IPI00783186. IPI00784020. IPI00868922. IPI00953250. |
| PIR | T00353. |
| RefSeq | NP_115593.3. NP_942592.1. |
| UniGene | Hs.644997 Hs.719092 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1N11 based on UniProtKB P16157. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O75179. 2 interactions. |
PTM databases | |
| PhosphoSite | O75179. |
Proteomic databases | |
| PRIDE | O75179. |
Genome annotation databases | |
| Ensembl | ENST00000358602; ENSP00000351416; ENSG00000132466; Homo sapiens. [Genome view] |
| GeneID | 26057. |
| KEGG | hsa:26057. |
| UCSC | uc003hgo.1. human. uc003hgq.1. human. |
Organism-specific databases | |
| CTD | 26057. |
| GeneCards | GC04M074159. |
| HGNC | HGNC:23575. ANKRD17. |
| PharmGKB | PA134943225. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOVERGEN | O75179. |
| InParanoid | O75179. |
| OMA | KNPAPVQ. |
| OrthoDB | EOG9J6V9B. |
Gene expression databases | |
| ArrayExpress | O75179. |
| Bgee | O75179. |
| CleanEx | HS_ANKRD17. |
| Genevestigator | O75179. |
Family and domain databases | |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. IPR000432. DNA_mismatch_repair_MutS_C. IPR004087. KH. IPR004088. KH_type_1. IPR018111. KH_type_1_subgr. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 5 hits. |
| Pfam | PF00023. Ank. 25 hits. PF00013. KH_1. 1 hit. PF00488. MutS_V. 1 hit. [Graphical view] |
| SMART | SM00248. ANK. 25 hits. SM00322. KH. 1 hit. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 20 hits. PS50084. KH_TYPE_1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 47934. |
Entry information
| Entry name | ANR17_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O75179 Secondary accession number(s): Q6PJ85 Q9H6J9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 4 Human chromosome 4: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with


