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Protein

Uncharacterized RNA-binding protein C1827.05c

Gene

SPCC1827.05c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized RNA-binding protein C1827.05c
Gene namesi
ORF Names:SPCC1827.05c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1827.05c
PomBaseiSPCC1827.05c

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003108211 – 276Uncharacterized RNA-binding protein C1827.05cAdd BLAST276

Proteomic databases

MaxQBiO74978
PaxDbiO74978
PRIDEiO74978

PTM databases

iPTMnetiO74978

Interactioni

Protein-protein interaction databases

BioGridi275954, 6 interactors
STRINGi4896.SPCC1827.05c.1

Structurei

3D structure databases

ProteinModelPortaliO74978
SMRiO74978
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini105 – 183RRMPROSITE-ProRule annotationAdd BLAST79

Phylogenomic databases

InParanoidiO74978
KOiK14838
OrthoDBiEOG092C4XOZ
PhylomeDBiO74978

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

O74978-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKAKSPIKS SKKSVNQPKS VLREKKVKDA EKAEHISLQG HVDNSDEEGQ
60 70 80 90 100
DKEFFPGFGS SDDDEEDSPN ALVNTSRQIM DLGEDAEKTI KKKVSENKNL
110 120 130 140 150
QKKKGVLYVG RLPHGFYEKQ MRMYFSQFGP VLRLRMSRNR KTGSSKHYAF
160 170 180 190 200
IEFESLDVAN VVAETMHNYL LYGKLLQCKV IPEDQVHENM FKGADVPFKR
210 220 230 240 250
IPHATIARLQ HEKPLSKEKA DKLITRHNRK LKLKKRKLKE LGITLESDVS
260 270
HPKAASPVAS KKSSKKKNKK VLAAHK
Length:276
Mass (Da):31,404
Last modified:November 1, 1998 - v1
Checksum:i9BB7D5F16F8D8DA0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA Translation: CAA19313.1
PIRiT41166
RefSeqiNP_588551.1, NM_001023538.2

Genome annotation databases

EnsemblFungiiSPCC1827.05c.1; SPCC1827.05c.1:pep; SPCC1827.05c
GeneIDi2539389
KEGGispo:SPCC1827.05c

Similar proteinsi

Entry informationi

Entry nameiYQL5_SCHPO
AccessioniPrimary (citable) accession number: O74978
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: November 1, 1998
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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