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Protein

Putative peroxisomal-coenzyme A synthetase

Gene

SPCC1827.03c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi166 – 177AMPSequence analysisAdd BLAST12

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ligase

Enzyme and pathway databases

ReactomeiR-SPO-75876. Synthesis of very long-chain fatty acyl-CoAs.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative peroxisomal-coenzyme A synthetase (EC:6.-.-.-)
Gene namesi
ORF Names:SPCC1827.03c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1827.03c.
PomBaseiSPCC1827.03c.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
  • peroxisomal membrane Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Peroxisome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001931831 – 512Putative peroxisomal-coenzyme A synthetaseAdd BLAST512

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei283Phosphoserine1 Publication1
Modified residuei284Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO74976.
PRIDEiO74976.

PTM databases

iPTMnetiO74976.

Interactioni

Protein-protein interaction databases

BioGridi275823. 24 interactors.
MINTiMINT-4682210.

Structurei

3D structure databases

ProteinModelPortaliO74976.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi510 – 512Microbody targeting signalSequence analysis3

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229994.
InParanoidiO74976.
OMAiNASNKLM.
OrthoDBiEOG092C36OV.
PhylomeDBiO74976.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O74976-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFTTLYSAI QGDASARALV APSLNAELSF SELRIAIMDL QRQIASLGIK
60 70 80 90 100
VGDPVNIAIP NGLEFVVAFY AVSWQRAICG PLNSNYKQSE FEFYIDDLKS
110 120 130 140 150
KLVIVPEGSV AANTPAVRAA KKLSVAVAEL AWCPKSRLVR IVHFEGAKIN
160 170 180 190 200
APQPLGLPQP DDVMLVLHTS GTTGRPKVVP LTHKNLCRSI HNITTSYRLD
210 220 230 240 250
PRDTSYVVMP LFHVHGLLCG LLSTLASGGC AVVPPKFSAH SFWKEFIQYG
260 270 280 290 300
ATWYTAVPTI HQILLRTPPP KPLPRIRFIR SCSSPLAPPV LSKLEATFRA
310 320 330 340 350
PVLEAYAMTE ASHQMTTNPL PPLVHKPHSV GKPFGVELKI LDQKGNEMPQ
360 370 380 390 400
GKEGEICVRG INVTKGYLNN PAANKSSFTK DRFFRTGDEG KLDKDGYVFI
410 420 430 440 450
TGRIKELVNR GGEKISPAEI DAVLMQHPDV SEAVCFAVPD EKYGQDIQAA
460 470 480 490 500
INPVAGKTVT PKQLHDYLEQ KVAAFKIPKK FYFTDRIPKT ATGKVQRRLV
510
CDAFFNHSKA KL
Length:512
Mass (Da):56,274
Last modified:November 1, 1998 - v1
Checksum:i7D7D851734277808
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti218Missing in BAA13768 (PubMed:9501991).Curated1
Sequence conflicti288P → T in BAA13768 (PubMed:9501991).Curated1
Sequence conflicti305A → G in BAA13768 (PubMed:9501991).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA19311.1.
D89105 mRNA. Translation: BAA13768.1.
PIRiT41164.
RefSeqiNP_588549.1. NM_001023536.2.

Genome annotation databases

EnsemblFungiiSPCC1827.03c.1; SPCC1827.03c.1:pep; SPCC1827.03c.
GeneIDi2539253.
KEGGispo:SPCC1827.03c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA19311.1.
D89105 mRNA. Translation: BAA13768.1.
PIRiT41164.
RefSeqiNP_588549.1. NM_001023536.2.

3D structure databases

ProteinModelPortaliO74976.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275823. 24 interactors.
MINTiMINT-4682210.

PTM databases

iPTMnetiO74976.

Proteomic databases

MaxQBiO74976.
PRIDEiO74976.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC1827.03c.1; SPCC1827.03c.1:pep; SPCC1827.03c.
GeneIDi2539253.
KEGGispo:SPCC1827.03c.

Organism-specific databases

EuPathDBiFungiDB:SPCC1827.03c.
PomBaseiSPCC1827.03c.

Phylogenomic databases

HOGENOMiHOG000229994.
InParanoidiO74976.
OMAiNASNKLM.
OrthoDBiEOG092C36OV.
PhylomeDBiO74976.

Enzyme and pathway databases

ReactomeiR-SPO-75876. Synthesis of very long-chain fatty acyl-CoAs.

Miscellaneous databases

PROiO74976.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFAT2_SCHPO
AccessioniPrimary (citable) accession number: O74976
Secondary accession number(s): P78757
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.