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Protein

60S ribosomal protein L24-B

Gene

rpl2402

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiREACT_285524. SRP-dependent cotranslational protein targeting to membrane.
REACT_286053. Formation of a pool of free 40S subunits.
REACT_288072. L13a-mediated translational silencing of Ceruloplasmin expression.
REACT_294969. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_311207. Peptide chain elongation.
REACT_314493. GTP hydrolysis and joining of the 60S ribosomal subunit.
REACT_320087. Eukaryotic Translation Termination.
REACT_351650. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L24-B
Gene namesi
Name:rpl2402
Synonyms:rpl24, rpl24b
ORF Names:SPCC330.14c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
ProteomesiUP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC330.14c.
PomBaseiSPCC330.14c. rpl2402.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14914960S ribosomal protein L24-BPRO_0000136892Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei50 – 501Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Interactioni

Protein-protein interaction databases

BioGridi275430. 23 interactions.
IntActiO74884. 2 interactions.
MINTiMINT-4681538.

Structurei

3D structure databases

ProteinModelPortaliO74884.
SMRiO74884. Positions 4-56.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L24e family.Curated

Phylogenomic databases

HOGENOMiHOG000184343.
InParanoidiO74884.
KOiK02896.
OMAiKCERSFL.
OrthoDBiEOG718KQP.
PhylomeDBiO74884.

Family and domain databases

Gene3Di2.30.170.20. 1 hit.
InterProiIPR000988. Ribosomal_L24e-rel.
IPR023442. Ribosomal_L24e_CS.
IPR023441. Ribosomal_L24e_dom.
[Graphical view]
PANTHERiPTHR10792. PTHR10792. 1 hit.
PfamiPF01246. Ribosomal_L24e. 1 hit.
[Graphical view]
PROSITEiPS01073. RIBOSOMAL_L24E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O74884-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVEVCSFSG SKVYPGAGRL FVRGDNKVFR FVNKKSESLF LQRKNPRRLS
60 70 80 90 100
WTVLYRRMHK KGISEEHAKK RTRRTVKHQR GIVGANLDVI KEKRNQRPEV
110 120 130 140
RAAARAAALK QRKDKRAASE SEKKAIKAKS AASSARGQAI KNAKVAARR
Length:149
Mass (Da):16,912
Last modified:November 1, 1998 - v1
Checksum:iE34171D4344C8193
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB032714 mRNA. Translation: BAA84653.1.
CU329672 Genomic DNA. Translation: CAA20919.1.
PIRiT41324.
RefSeqiNP_587714.1. NM_001022709.2.

Genome annotation databases

EnsemblFungiiSPCC330.14c.1; SPCC330.14c.1:pep; SPCC330.14c.
GeneIDi2538849.
KEGGispo:SPCC330.14c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB032714 mRNA. Translation: BAA84653.1.
CU329672 Genomic DNA. Translation: CAA20919.1.
PIRiT41324.
RefSeqiNP_587714.1. NM_001022709.2.

3D structure databases

ProteinModelPortaliO74884.
SMRiO74884. Positions 4-56.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275430. 23 interactions.
IntActiO74884. 2 interactions.
MINTiMINT-4681538.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC330.14c.1; SPCC330.14c.1:pep; SPCC330.14c.
GeneIDi2538849.
KEGGispo:SPCC330.14c.

Organism-specific databases

EuPathDBiFungiDB:SPCC330.14c.
PomBaseiSPCC330.14c. rpl2402.

Phylogenomic databases

HOGENOMiHOG000184343.
InParanoidiO74884.
KOiK02896.
OMAiKCERSFL.
OrthoDBiEOG718KQP.
PhylomeDBiO74884.

Enzyme and pathway databases

ReactomeiREACT_285524. SRP-dependent cotranslational protein targeting to membrane.
REACT_286053. Formation of a pool of free 40S subunits.
REACT_288072. L13a-mediated translational silencing of Ceruloplasmin expression.
REACT_294969. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
REACT_311207. Peptide chain elongation.
REACT_314493. GTP hydrolysis and joining of the 60S ribosomal subunit.
REACT_320087. Eukaryotic Translation Termination.
REACT_351650. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).

Miscellaneous databases

NextBioi20800031.
PROiO74884.

Family and domain databases

Gene3Di2.30.170.20. 1 hit.
InterProiIPR000988. Ribosomal_L24e-rel.
IPR023442. Ribosomal_L24e_CS.
IPR023441. Ribosomal_L24e_dom.
[Graphical view]
PANTHERiPTHR10792. PTHR10792. 1 hit.
PfamiPF01246. Ribosomal_L24e. 1 hit.
[Graphical view]
PROSITEiPS01073. RIBOSOMAL_L24E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "S.pombe ribosomal protein L24 homolog."
    Kawamukai M.
    Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50, IDENTIFICATION BY MASS SPECTROMETRY.

Entry informationi

Entry nameiRL24B_SCHPO
AccessioniPrimary (citable) accession number: O74884
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 27, 2004
Last sequence update: November 1, 1998
Last modified: July 22, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

There are two genes for L24 in S.pombe.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.