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O74884

- RL24B_SCHPO

UniProt

O74884 - RL24B_SCHPO

Protein

60S ribosomal protein L24-B

Gene

rpl24b

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Nov 1998)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: PomBase

    GO - Biological processi

    1. cytoplasmic translation Source: PomBase

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    ReactomeiREACT_188294. SRP-dependent cotranslational protein targeting to membrane.
    REACT_188542. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_188560. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
    REACT_206850. Formation of a pool of free 40S subunits.
    REACT_215930. GTP hydrolysis and joining of the 60S ribosomal subunit.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L24-B
    Gene namesi
    Name:rpl24b
    Synonyms:rpl24, rpl2402
    ORF Names:SPCC330.14c
    OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    Taxonomic identifieri284812 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
    ProteomesiUP000002485: Chromosome III

    Organism-specific databases

    PomBaseiSPCC330.14c.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: PomBase
    2. cytosolic large ribosomal subunit Source: PomBase

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14914960S ribosomal protein L24-BPRO_0000136892Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei50 – 501Phosphoserine1 Publication

    Keywords - PTMi

    Phosphoprotein

    Interactioni

    Protein-protein interaction databases

    BioGridi275430. 25 interactions.
    IntActiO74884. 2 interactions.
    MINTiMINT-4681538.
    STRINGi4896.SPCC330.14c-1.

    Structurei

    3D structure databases

    ProteinModelPortaliO74884.
    SMRiO74884. Positions 4-56.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L24e family.Curated

    Phylogenomic databases

    HOGENOMiHOG000184343.
    KOiK02896.
    OMAiNQTEDFR.
    OrthoDBiEOG718KQP.
    PhylomeDBiO74884.

    Family and domain databases

    Gene3Di2.30.170.20. 1 hit.
    InterProiIPR023442. Ribosomal_L24e_CS.
    IPR023441. Ribosomal_L24e_dom.
    IPR000988. Ribosomal_L24e_rel.
    [Graphical view]
    PANTHERiPTHR10792. PTHR10792. 1 hit.
    PfamiPF01246. Ribosomal_L24e. 1 hit.
    [Graphical view]
    PROSITEiPS01073. RIBOSOMAL_L24E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O74884-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVEVCSFSG SKVYPGAGRL FVRGDNKVFR FVNKKSESLF LQRKNPRRLS    50
    WTVLYRRMHK KGISEEHAKK RTRRTVKHQR GIVGANLDVI KEKRNQRPEV 100
    RAAARAAALK QRKDKRAASE SEKKAIKAKS AASSARGQAI KNAKVAARR 149
    Length:149
    Mass (Da):16,912
    Last modified:November 1, 1998 - v1
    Checksum:iE34171D4344C8193
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB032714 mRNA. Translation: BAA84653.1.
    CU329672 Genomic DNA. Translation: CAA20919.1.
    PIRiT41324.
    RefSeqiNP_587714.1. NM_001022709.2.

    Genome annotation databases

    EnsemblFungiiSPCC330.14c.1; SPCC330.14c.1:pep; SPCC330.14c.
    GeneIDi2538849.
    KEGGispo:SPCC330.14c.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB032714 mRNA. Translation: BAA84653.1 .
    CU329672 Genomic DNA. Translation: CAA20919.1 .
    PIRi T41324.
    RefSeqi NP_587714.1. NM_001022709.2.

    3D structure databases

    ProteinModelPortali O74884.
    SMRi O74884. Positions 4-56.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 275430. 25 interactions.
    IntActi O74884. 2 interactions.
    MINTi MINT-4681538.
    STRINGi 4896.SPCC330.14c-1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii SPCC330.14c.1 ; SPCC330.14c.1:pep ; SPCC330.14c .
    GeneIDi 2538849.
    KEGGi spo:SPCC330.14c.

    Organism-specific databases

    PomBasei SPCC330.14c.

    Phylogenomic databases

    HOGENOMi HOG000184343.
    KOi K02896.
    OMAi NQTEDFR.
    OrthoDBi EOG718KQP.
    PhylomeDBi O74884.

    Enzyme and pathway databases

    Reactomei REACT_188294. SRP-dependent cotranslational protein targeting to membrane.
    REACT_188542. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
    REACT_188560. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
    REACT_206850. Formation of a pool of free 40S subunits.
    REACT_215930. GTP hydrolysis and joining of the 60S ribosomal subunit.

    Miscellaneous databases

    NextBioi 20800031.

    Family and domain databases

    Gene3Di 2.30.170.20. 1 hit.
    InterProi IPR023442. Ribosomal_L24e_CS.
    IPR023441. Ribosomal_L24e_dom.
    IPR000988. Ribosomal_L24e_rel.
    [Graphical view ]
    PANTHERi PTHR10792. PTHR10792. 1 hit.
    Pfami PF01246. Ribosomal_L24e. 1 hit.
    [Graphical view ]
    PROSITEi PS01073. RIBOSOMAL_L24E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "S.pombe ribosomal protein L24 homolog."
      Kawamukai M.
      Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The genome sequence of Schizosaccharomyces pombe."
      Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
      , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
      Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 972 / ATCC 24843.
    3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50, IDENTIFICATION BY MASS SPECTROMETRY.

    Entry informationi

    Entry nameiRL24B_SCHPO
    AccessioniPrimary (citable) accession number: O74884
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 27, 2004
    Last sequence update: November 1, 1998
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    There are two genes for L24 in S.pombe.

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Schizosaccharomyces pombe
      Schizosaccharomyces pombe: entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3