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Protein

60S ribosomal protein L1-B

Gene

rpl101

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L1-B
Alternative name(s):
L10a
Gene namesi
Name:rpl101
Synonyms:rpl10a-1, rpl1b
ORF Names:SPCC1183.08c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1183.08c.
PomBaseiSPCC1183.08c. rpl101.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 21621660S ribosomal protein L1-BPRO_0000125841Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei11 – 111Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO74836.

PTM databases

iPTMnetiO74836.

Interactioni

Protein-protein interaction databases

BioGridi275792. 5 interactions.
MINTiMINT-4681113.

Structurei

3D structure databases

ProteinModelPortaliO74836.
SMRiO74836. Positions 4-215.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L1P family.Curated

Phylogenomic databases

HOGENOMiHOG000207014.
InParanoidiO74836.
KOiK02865.
OMAiMTICIFG.
OrthoDBiEOG092C4PD0.
PhylomeDBiO74836.

Family and domain databases

CDDicd00403. Ribosomal_L1. 1 hit.
Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O74836-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKVSVASVR SNVEQILKGS EEKKRNFTET VELQIGLKNY DPQRDKRFSG
60 70 80 90 100
TIKLPNVPRP NMAICILGDA HDLDRAKHGG VDAMSVDDLK KLNKNKKLVK
110 120 130 140 150
KLAKKYDAFI ASEVLIKQIP RLLGPGLSKA GKFPSPVSHA DDLYGKITEV
160 170 180 190 200
KSTIKFQLKK VLCLGVAVGH VEMSEEQLIA NIMLAVNFLV SLLKKGWQNI
210
GSLVVKSTMG KPHRLY
Length:216
Mass (Da):23,917
Last modified:November 1, 1998 - v1
Checksum:iD99F8DA23FC0D8D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA21088.1.
PIRiT40848.
RefSeqiNP_587891.1. NM_001022883.2.

Genome annotation databases

EnsemblFungiiSPCC1183.08c.1; SPCC1183.08c.1:pep; SPCC1183.08c.
GeneIDi2539222.
KEGGispo:SPCC1183.08c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA21088.1.
PIRiT40848.
RefSeqiNP_587891.1. NM_001022883.2.

3D structure databases

ProteinModelPortaliO74836.
SMRiO74836. Positions 4-215.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275792. 5 interactions.
MINTiMINT-4681113.

PTM databases

iPTMnetiO74836.

Proteomic databases

MaxQBiO74836.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC1183.08c.1; SPCC1183.08c.1:pep; SPCC1183.08c.
GeneIDi2539222.
KEGGispo:SPCC1183.08c.

Organism-specific databases

EuPathDBiFungiDB:SPCC1183.08c.
PomBaseiSPCC1183.08c. rpl101.

Phylogenomic databases

HOGENOMiHOG000207014.
InParanoidiO74836.
KOiK02865.
OMAiMTICIFG.
OrthoDBiEOG092C4PD0.
PhylomeDBiO74836.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiO74836.

Family and domain databases

CDDicd00403. Ribosomal_L1. 1 hit.
Gene3Di3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProiIPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamiPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMiSSF56808. SSF56808. 1 hit.
PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL1B_SCHPO
AccessioniPrimary (citable) accession number: O74836
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

There are two genes for L1 in S.pombe.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.