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Protein

G-patch and R3H domain-containing protein C30B4.02c

Gene

SPBC30B4.02c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
G-patch and R3H domain-containing protein C30B4.02c
Gene namesi
ORF Names:SPBC30B4.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC30B4.02c.
PomBaseiSPBC30B4.02c.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
  • preribosome, small subunit precursor Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 695695G-patch and R3H domain-containing protein C30B4.02cPRO_0000303957Add
BLAST

Proteomic databases

MaxQBiO74363.

Interactioni

Protein-protein interaction databases

BioGridi276944. 28 interactions.
MINTiMINT-4678496.

Structurei

3D structure databases

ProteinModelPortaliO74363.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini525 – 58763R3HPROSITE-ProRule annotationAdd
BLAST
Domaini652 – 69544G-patchPROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi264 – 35592Glu-richAdd
BLAST
Compositional biasi401 – 502102Lys-richAdd
BLAST

Sequence similaritiesi

Contains 1 G-patch domain.PROSITE-ProRule annotation
Contains 1 R3H domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiO74363.
OMAiIFINDVY.
OrthoDBiEOG7ZGXCD.

Family and domain databases

Gene3Di3.30.1370.50. 1 hit.
InterProiIPR000467. G_patch_dom.
IPR001374. R3H_dom.
[Graphical view]
PfamiPF01585. G-patch. 1 hit.
PF01424. R3H. 1 hit.
[Graphical view]
SMARTiSM00443. G_patch. 1 hit.
SM00393. R3H. 1 hit.
[Graphical view]
SUPFAMiSSF82708. SSF82708. 1 hit.
PROSITEiPS50174. G_PATCH. 1 hit.
PS51061. R3H. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O74363-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNFDDLQIL DQLQTSARFR GDTRIRRFKG SNNSKSPFGL NPSSRISQWP
60 70 80 90 100
RITFIRAKDN YNPAEELCQL IDEQNAHNEA KHQSKEIMLP KETNVKSCED
110 120 130 140 150
LSKTGEIKAL DIVLFKAITS KGDTLKVKKI PEYAEAFDTT KNVEVSSFPE
160 170 180 190 200
KSMNENVLIQ HSLNLAPSDK EISSTEESEQ LCYKEQESEK ELYSKDNDDS
210 220 230 240 250
LDILNVPNLV NDDIANNNAA PPPPLAQAQE QLSTENEDEF DIDDTTDKMT
260 270 280 290 300
TFTMNKFADL SVLEEDDDDE DEDEELEGEK EEEEEEKEKP EISNYDETEG
310 320 330 340 350
KVNFSLEDSE SLEFDEGSDD YDYAKLTTEL VGNTDSLAED EDDILEEDED
360 370 380 390 400
EDEEELLAIF DASDDSEIEA YLSIGDTLQN DFTIYDYDSE DEEYNNPSTQ
410 420 430 440 450
KTEKVSQSKK GAKVKEEKGL KKDRKLPKKM RKAQKKLERK AGKAVAARMG
460 470 480 490 500
DAFSNSLDDE SMNLYAELQE QWLKDKSKKA RRRAEREKLR SEGLLGKKSK
510 520 530 540 550
KKLLRESQKP SSSDSDNASL TRIDKIFIND VYQRMQQFKH SAIEEISLPP
560 570 580 590 600
CRKYVRRLVH ALANDLNLKS RSYGSGNKRY TMLSKTHKFD ASSVDLVSLT
610 620 630 640 650
RIMERLQTRV EYQSFSKSGR KSRMTVSSVR SSKATRVYDG QIVGEDAPEI
660 670 680 690
SKENPGRRLL EKLGWYAGKG LGHPENEGSK DSLRAIVKVS RSGLG
Length:695
Mass (Da):79,052
Last modified:November 1, 1998 - v1
Checksum:iD91C8CD40CF0EAD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA20315.1.
PIRiT40168.
RefSeqiNP_595527.1. NM_001021437.2.

Genome annotation databases

EnsemblFungiiSPBC30B4.02c.1; SPBC30B4.02c.1:pep; SPBC30B4.02c.
GeneIDi2540416.
KEGGispo:SPBC30B4.02c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA20315.1.
PIRiT40168.
RefSeqiNP_595527.1. NM_001021437.2.

3D structure databases

ProteinModelPortaliO74363.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276944. 28 interactions.
MINTiMINT-4678496.

Proteomic databases

MaxQBiO74363.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC30B4.02c.1; SPBC30B4.02c.1:pep; SPBC30B4.02c.
GeneIDi2540416.
KEGGispo:SPBC30B4.02c.

Organism-specific databases

EuPathDBiFungiDB:SPBC30B4.02c.
PomBaseiSPBC30B4.02c.

Phylogenomic databases

InParanoidiO74363.
OMAiIFINDVY.
OrthoDBiEOG7ZGXCD.

Miscellaneous databases

NextBioi20801543.
PROiO74363.

Family and domain databases

Gene3Di3.30.1370.50. 1 hit.
InterProiIPR000467. G_patch_dom.
IPR001374. R3H_dom.
[Graphical view]
PfamiPF01585. G-patch. 1 hit.
PF01424. R3H. 1 hit.
[Graphical view]
SMARTiSM00443. G_patch. 1 hit.
SM00393. R3H. 1 hit.
[Graphical view]
SUPFAMiSSF82708. SSF82708. 1 hit.
PROSITEiPS50174. G_PATCH. 1 hit.
PS51061. R3H. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYND2_SCHPO
AccessioniPrimary (citable) accession number: O74363
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: November 1, 1998
Last modified: December 9, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.