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Protein

Uncharacterized transcriptional regulatory protein C15D4.02

Gene

SPBC15D4.02

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi174 – 201Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd BLAST28

GO - Molecular functioni

GO - Biological processi

  • galactose-specific flocculation Source: PomBase
  • meiotic cell cycle Source: PomBase
  • negative regulation of flocculation Source: PomBase
  • negative regulation of transcription from RNA polymerase II promoter Source: PomBase
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C15D4.02
Gene namesi
ORF Names:SPBC15D4.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC15D4.02.
PomBaseiSPBC15D4.02.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003103921 – 547Uncharacterized transcriptional regulatory protein C15D4.02Add BLAST547

Proteomic databases

MaxQBiO74308.
PRIDEiO74308.

Interactioni

Protein-protein interaction databases

BioGridi276377. 3 interactors.
MINTiMINT-4678124.
STRINGi4896.SPBC15D4.02.1.

Structurei

3D structure databases

SMRiO74308.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi30 – 135Pro-richAdd BLAST106

Phylogenomic databases

InParanoidiO74308.
KOiK21632.
OrthoDBiEOG092C4KV1.

Family and domain databases

CDDicd00067. GAL4. 1 hit.
Gene3Di4.10.240.10. 1 hit.
InterProiView protein in InterPro
IPR001138. Zn2-C6_fun-type_DNA-bd.
IPR036864. Zn2-C6_fun-type_DNA-bd_sf.
PfamiView protein in Pfam
PF00172. Zn_clus. 1 hit.
SMARTiView protein in SMART
SM00066. GAL4. 1 hit.
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiView protein in PROSITE
PS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O74308-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEYHPSSQSP QVNPGMESQQ GGYTYTYQQP APPNSLHLQH PSILTRLPPL
60 70 80 90 100
SSSVVSPSLA SLPPFTPTST YHSIAALTPP SYPQSSSAPS NNSYTIVPSP
110 120 130 140 150
HDPSNAYSMH HVLQNTAPQS VPSPSPIEMV PPSPPKTGSN NSAPVTGKTV
160 170 180 190 200
QSGNALNNSG LVKRQARKRT KTGCLTCRKR RIKCDERKPI CYNCIKSKRQ
210 220 230 240 250
CEGYTHFPRP SGTFTASRRI PVSSLLSEPA PHGLAGQPTH PTFLYYIQSV
260 270 280 290 300
APSLCLWDAC HFPPLSPYSS FSSIYWSSTV PELALRNPNI SVALYAFASA
310 320 330 340 350
KRHLTDDAVA FARQARVALT NITTTDSLLI LVLLAVTQLY IPKSDIQLFN
360 370 380 390 400
FAVDQVVKFD ASLMTSPSDE IITYLLRRMF IRQVVLAGIV KPLASGLNPL
410 420 430 440 450
PLLKCDLPPA TTPTAVLDES LFHLGLRKLC HEKGLEPEFT KWSKNCPIDK
460 470 480 490 500
ADLPRLALLM IHAVFTSPVS LAQWVELILQ NPDPTPAIHI ARACLLAVHG
510 520 530 540
VVDLGDLQMK VEKCVQSCEE RQLQATISNF STEVAQTNSS ALAIGCQ
Length:547
Mass (Da):59,642
Last modified:October 3, 2012 - v3
Checksum:iA65FD7D039B6CD18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA20477.3.
PIRiT39478.
RefSeqiNP_596242.3. NM_001022161.2.

Genome annotation databases

EnsemblFungiiSPBC15D4.02.1; SPBC15D4.02.1:pep; SPBC15D4.02.
GeneIDi2539828.
KEGGispo:SPBC15D4.02.

Similar proteinsi

Entry informationi

Entry nameiYOG2_SCHPO
AccessioniPrimary (citable) accession number: O74308
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: October 3, 2012
Last modified: October 25, 2017
This is version 103 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names