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O74088 (O74088_PYRHO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PH0242 EMBL BAA29314.1
OrganismPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP] EMBL BAA29314.1
Taxonomic identifier70601 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length976 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding5561Calcium PDB 3VU1
Metal binding7651Calcium; via carbonyl oxygen PDB 3VU1
Metal binding7991Calcium; via carbonyl oxygen PDB 3VU1
Metal binding8021Calcium PDB 3VU1
Binding site8721Chloride PDB 3VU1

Sequences

Sequence LengthMass (Da)Tools
O74088 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: BF5FB82FBADC60A9

FASTA976109,970
        10         20         30         40         50         60 
MVKSKVKKVE KGKEGEEKRS TYVLLKKVLI PILVFGFAIY AFYLRHLTAG KYFPDPDTFY 

        70         80         90        100        110        120 
HFEIYKLVLK EGLPRYYPMS DAPFGSLIGE PLGLYLLPAA FYKVVSLFGY NELQAFLLWP 

       130        140        150        160        170        180 
PFVGFLGVIA VYLLGRKVLN EWTGLWGAVV LTVSTANFSR TFSGNARGDG PFMALFIFAS 

       190        200        210        220        230        240 
VAMLYYLKES NKTRKIIYGT LFVLLTVISL GAWNGSPFGL MVLLGFASLQ TIILFIFGKL 

       250        260        270        280        290        300 
EELKKFVKEF YPAYLAILAF GYALTFPGIV KIGGFIRFAF EVFLGLIFLL VIMLYGGRYL 

       310        320        330        340        350        360 
NYSDKKHRFL VVTIIVLLGF GGAYAYVGPK LFRLMGGAYQ STQVYETVQE LAKTTIGDVK 

       370        380        390        400        410        420 
AYYGVESGNG LIFFLSIPGL LILLTKYLYD LFKKAKSDNE TLFALVFYTM SLYLLYLAVR 

       430        440        450        460        470        480 
FLFLASYAVA LFFGIFIGFS MDVIEKMKEN IGIKAALGIV LSLMILVIPF VHAPVLARSA 

       490        500        510        520        530        540 
RALKNTEIEV TGWEQALKWL RSNTSKYATA TSWWDYGYWI ESSLLGNRRA SADGGHARDR 

       550        560        570        580        590        600 
DHILALFLAR DGNISEVDFE SWELNYFIIY LNDWAKFNAI SYLGGAITRK EYNGDENGRG 

       610        620        630        640        650        660 
RVTTILLTQA AGNVYVNPYA RIVIKVIQQN KTRRIAVNIG QLECSPILSV AFPGNIKIKG 

       670        680        690        700        710        720 
SGRCSDGSPF PYVVYLTPSL GVLAYYKVAT SNFVKLAFGI PTSSYSEFAE KLFSNFIPVY 

       730        740        750        760        770        780 
QYGSVIVYEF RPFAIYKIED FINGTWREVG KLSPGKHTLR LYISAFGRDI KNATLYVYAL 

       790        800        810        820        830        840 
NGTKIIKRIK VGEIKYMNHL EEYPIIVNVT LPTAQKYRFI LAQKGPVGVL TGPVRVNGKI 

       850        860        870        880        890        900 
TNPAYIMREG ESGRLELKVG VDKEYTADLY LRATFIYLVR KGGKSNEDYD ASFEPHMDTF 

       910        920        930        940        950        960 
FITKLKEGIK LRPGENEIVV NAEMPKNAIS SYKEKLEKEH GDKLIIRGIR VEPVFIVEKE 

       970 
YTMIEVSASA PHHSSE 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3."
Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. expand/collapse author list , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T., Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.
DNA Res. 5:55-76(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3.
[2]"Crystallographic and NMR evidence for flexibility in oligosaccharyltransferases and its catalytic significance."
Nyirenda J., Matsumoto S., Saitoh T., Maita N., Noda N.N., Inagaki F., Kohda D.
Structure 21:32-41(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.70 ANGSTROMS) OF 482-976 IN COMPLEX WITH CALCIUM AND CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000001 Genomic DNA. Translation: BAA29314.1.
PIRC71248.
RefSeqNP_142238.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VU1X-ray2.70A/B482-976[»]
ProteinModelPortalO74088.
SMRO74088. Positions 489-972.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING70601.PH0242.

Protein family/group databases

CAZyGT66. Glycosyltransferase Family 66.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA29314; BAA29314; BAA29314.
GeneID1444132.
KEGGpho:PH0242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1287.
HOGENOMHOG000073801.
KOK07151.
OMAGYWIESS.
ProtClustDBCLSK253212.

Enzyme and pathway databases

BioCycPHOR70601:GJWR-233-MONOMER.

Family and domain databases

InterProIPR003674. Oligo_trans_STT3.
[Graphical view]
PfamPF02516. STT3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO74088_PYRHO
AccessionPrimary (citable) accession number: O74088
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: February 19, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)