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Protein
Submitted name:

Mix-like endodermal regulator

Gene

Mixer

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Mix-like endodermal regulatorImported
Gene namesi
Name:MixerImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO73867.
SMRiO73867. Positions 88-145.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini87 – 14761Homeobox DNA-bindingInterPro annotationAdd
BLAST

Keywords - Domaini

HomeoboxUniRule annotation

Phylogenomic databases

HOVERGENiHBG006359.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O73867-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTFSQQLED FYPSCFSARS SPVGFTDPPA QHLTMSLGAI QKDFQESSLK
60 70 80 90 100
ANVQPVSDPQ TLGTQKSTPP TKQEMVSPVS SVDVTLGSQR RKRTFYSQNK
110 120 130 140 150
LDVLEQFFQT NMYPDIHHRE ELAKRIYIPE SRVQVWFQNR RAKERRDKAK
160 170 180 190 200
LNPSPAVGVC YPSLRQPNKE MYPSNNPTPN VPVSQQHMVF QKPQGQLFMN
210 220 230 240 250
SQQNPFQPTQ ESQLCSESTY AVSQQRILMQ QAARSSYHGI SASYKPTDTQ
260 270 280 290 300
QHFYSYMSPM GGTQEKVMDL SKKHSQMPFH PSLLMDFNNF PPNKTITPDM
310 320 330 340 350
NVRIPPIPVS APSNNHSRMN VFNTKEAGPL VSLPEDVYEE FSPVSDSGVS
360 370
DGSTMSLTDF KDNDGSVLDN L
Length:371
Mass (Da):41,917
Last modified:August 1, 1998 - v1
Checksum:i17FAF3EBD8CE43B8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF068263 mRNA. Translation: AAC27074.1.
UniGeneiXl.291.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF068263 mRNA. Translation: AAC27074.1.
UniGeneiXl.291.

3D structure databases

ProteinModelPortaliO73867.
SMRiO73867. Positions 88-145.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG006359.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO73867_XENLA
AccessioniPrimary (citable) accession number: O73867
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: December 9, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.