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Protein

POU domain protein

Gene

Oct-6

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TranscriptionUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
POU domain proteinUniRule annotation
Gene namesi
Name:Oct-6Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO73861.
SMRiO73861. Positions 187-343.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini191 – 26575POU-specificInterPro annotationAdd
BLAST
Domaini281 – 34161Homeobox DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the POU transcription factor family.UniRule annotationSAAS annotation
Contains 1 POU-specific domain.UniRule annotation
Contains 1 homeobox DNA-binding domain.UniRule annotation

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG053120.
KOiK09365.
PhylomeDBiO73861.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.260.40. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR010982. Lambda_DNA-bd_dom.
IPR013847. POU.
IPR000327. POU_dom.
IPR016362. TF_POU_3.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
[Graphical view]
PIRSFiPIRSF002629. Transcription_factor_POU. 1 hit.
PRINTSiPR00028. POUDOMAIN.
SMARTiSM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O73861-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAAQYLPR SAGLLHPDGD RLHQGTTYRE VQKMMHHEYL QGLAPAAAGH
60 70 80 90 100
AVGLAHHQWL PSAGTDWGSG GGGGGGAHLP PAAEHGKGGP GGPREELPPA
110 120 130 140 150
AAFHPRPHLV RTGRWAQGGA APHLPPMSPP SGQPLLYGQP YGGLNGMLGP
160 170 180 190 200
PGPALHHGHG LRDPLGAEEA AGHELAASPP PPLGPPEPSD EDAPSSDDLE
210 220 230 240 250
QFAKQFKQRR IKLGFTQADV GLALGTLYGN VFSQTTICRF EALQLSFKNM
260 270 280 290 300
CKLKPLLNKW LEETDSSTGS PTNLDKIAAQ GRKRKKRTSI EVGVKGALEN
310 320 330 340 350
HFLKCPKPSA HEITSLADSL QLEKEVVRVW FCNRRQKEKR MTPAGLPHPP
360 370
MEDVYAQADT SPLHHALPGA VP
Length:372
Mass (Da):39,630
Last modified:August 1, 1998 - v1
Checksum:i7B7A7BC977DF02AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF064608 Genomic DNA. Translation: AAC18592.1.
RefSeqiNP_001026755.1. NM_001031584.1.
UniGeneiGga.32081.

Genome annotation databases

GeneIDi430270.
KEGGigga:430270.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF064608 Genomic DNA. Translation: AAC18592.1.
RefSeqiNP_001026755.1. NM_001031584.1.
UniGeneiGga.32081.

3D structure databases

ProteinModelPortaliO73861.
SMRiO73861. Positions 187-343.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi430270.
KEGGigga:430270.

Organism-specific databases

CTDi5453.

Phylogenomic databases

HOVERGENiHBG053120.
KOiK09365.
PhylomeDBiO73861.

Miscellaneous databases

NextBioi20830372.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.260.40. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR010982. Lambda_DNA-bd_dom.
IPR013847. POU.
IPR000327. POU_dom.
IPR016362. TF_POU_3.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
[Graphical view]
PIRSFiPIRSF002629. Transcription_factor_POU. 1 hit.
PRINTSiPR00028. POUDOMAIN.
SMARTiSM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparison of sequence and function of the Oct-6 genes in zebrafish, chicken and mouse."
    Levavasseur F., Mandemakers W., Visser P., Broos L., Grosveld F., Zivkovic D., Meijer D.
    Mech. Dev. 74:89-98(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO73861_CHICK
AccessioniPrimary (citable) accession number: O73861
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: May 11, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.