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Protein

POU domain protein

Gene

Oct-6

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi283 – 342HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
POU domain proteinUniRule annotation
Gene namesi
Name:Oct-6Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO73861.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini191 – 265POU-specificInterPro annotationAdd BLAST75
Domaini281 – 341HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the POU transcription factor family.UniRule annotationSAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG053120.
PhylomeDBiO73861.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR010982. Lambda_DNA-bd_dom.
IPR013847. POU.
IPR000327. POU_dom.
IPR016362. TF_POU_3.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
PIRSFiPIRSF002629. Transcription_factor_POU. 1 hit.
PRINTSiPR00028. POUDOMAIN.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.

Sequencei

Sequence statusi: Complete.

O73861-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAAQYLPR SAGLLHPDGD RLHQGTTYRE VQKMMHHEYL QGLAPAAAGH
60 70 80 90 100
AVGLAHHQWL PSAGTDWGSG GGGGGGAHLP PAAEHGKGGP GGPREELPPA
110 120 130 140 150
AAFHPRPHLV RTGRWAQGGA APHLPPMSPP SGQPLLYGQP YGGLNGMLGP
160 170 180 190 200
PGPALHHGHG LRDPLGAEEA AGHELAASPP PPLGPPEPSD EDAPSSDDLE
210 220 230 240 250
QFAKQFKQRR IKLGFTQADV GLALGTLYGN VFSQTTICRF EALQLSFKNM
260 270 280 290 300
CKLKPLLNKW LEETDSSTGS PTNLDKIAAQ GRKRKKRTSI EVGVKGALEN
310 320 330 340 350
HFLKCPKPSA HEITSLADSL QLEKEVVRVW FCNRRQKEKR MTPAGLPHPP
360 370
MEDVYAQADT SPLHHALPGA VP
Length:372
Mass (Da):39,630
Last modified:August 1, 1998 - v1
Checksum:i7B7A7BC977DF02AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF064608 Genomic DNA. Translation: AAC18592.1.
RefSeqiNP_001026755.1. NM_001031584.1.
UniGeneiGga.32081.

Genome annotation databases

GeneIDi430270.

Similar proteinsi

Entry informationi

Entry nameiO73861_CHICK
AccessioniPrimary (citable) accession number: O73861
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 27, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)