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Protein
Submitted name:

Heparin cofactor II

Gene

serpind1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Protein family/group databases

MEROPSiI04.019.

Names & Taxonomyi

Protein namesi
Submitted name:
Heparin cofactor IIImported
Gene namesi
Name:serpind1Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6085778. serpind1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 484466Sequence analysisPRO_5004159697Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliO73839.
SMRiO73839. Positions 60-484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini121 – 481361SERPINInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the serpin family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOVERGENiHBG101242.
KOiK03912.

Family and domain databases

InterProiIPR023795. Serpin_CS.
IPR023796. Serpin_dom.
IPR000215. Serpin_fam.
[Graphical view]
PANTHERiPTHR11461. PTHR11461. 1 hit.
PfamiPF00079. Serpin. 1 hit.
[Graphical view]
SMARTiSM00093. SERPIN. 1 hit.
[Graphical view]
SUPFAMiSSF56574. SSF56574. 1 hit.
PROSITEiPS00284. SERPIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O73839-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLLHLATIF LLIHATLGGV KDLQEHFEDT STGINPRGSQ TQAVENLLDD
60 70 80 90 100
TVTNDLSTEG EDEEDYLDFD KIFGEDEDYI DIIDAAPEIK NSETQQGNIF
110 120 130 140 150
ELFHGKTRVQ RLNIINANFG FNLYRAIKNN TDASENILLA PVGISTAMAT
160 170 180 190 200
ISLGTKGQTL EQVLLTLGFK DFLNASSKYE ILTLHNVFRK LTHRLFRRNF
210 220 230 240 250
GYTLRSVNDI YVKRDFLIRE PFKNNLKNYY FAEAQTVDFG YKDFLTKANK
260 270 280 290 300
RIQQLTKGLI EEALTNVDPA LLMLLVNCIY FKGTWENKFP VEYTQNMNFR
310 320 330 340 350
LNEKELVKVP MMKTKGNFLV AADPELDCAV LQLPYVGNIS MLIVLPHKLS
360 370 380 390 400
GMKLLEKQIS PQVVERWQNI MTNRTREVFL PRFKLEKSYD LQKVLSNMGA
410 420 430 440 450
TDLFTHGDFS GVSDKDINIG LFQHQGTITV NEEGTEAAAV TVVGFMPLST
460 470 480
QARFVADRPF LFLIYEHRTN CLVFMGRVAN PTKS
Length:484
Mass (Da):55,090
Last modified:August 1, 1998 - v1
Checksum:i880033EA8B50C57F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF061727 mRNA. Translation: AAC16323.1.
RefSeqiNP_001080817.1. NM_001087348.1.
UniGeneiXl.280.

Genome annotation databases

GeneIDi380511.
KEGGixla:380511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF061727 mRNA. Translation: AAC16323.1.
RefSeqiNP_001080817.1. NM_001087348.1.
UniGeneiXl.280.

3D structure databases

ProteinModelPortaliO73839.
SMRiO73839. Positions 60-484.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

MEROPSiI04.019.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi380511.
KEGGixla:380511.

Organism-specific databases

CTDi3053.
XenbaseiXB-GENE-6085778. serpind1.

Phylogenomic databases

HOVERGENiHBG101242.
KOiK03912.

Family and domain databases

InterProiIPR023795. Serpin_CS.
IPR023796. Serpin_dom.
IPR000215. Serpin_fam.
[Graphical view]
PANTHERiPTHR11461. PTHR11461. 1 hit.
PfamiPF00079. Serpin. 1 hit.
[Graphical view]
SMARTiSM00093. SERPIN. 1 hit.
[Graphical view]
SUPFAMiSSF56574. SSF56574. 1 hit.
PROSITEiPS00284. SERPIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO73839_XENLA
AccessioniPrimary (citable) accession number: O73839
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: May 11, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.