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Protein
Submitted name:

High mobility group protein I-C

Gene

HMGI-C

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group protein I-CImported
Gene namesi
Name:HMGI-CImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiO73816.

Expressioni

Gene expression databases

BgeeiENSGALG00000009875.
ExpressionAtlasiO73816. baseline.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000016038.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
HOVERGENiHBG051913.
KOiK09283.
PhylomeDBiO73816.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PfamiPF02178. AT_hook. 3 hits.
[Graphical view]
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O73816-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAQGEGPGQ SSTAAPEQPA AAEPQKRGRG RPRKQPQEPT GEPSPKRPRG
60 70 80 90 100
RPKGSKNKSP SKAAQKKAEA TGEKRPRGRP RKWPQQVVQK KPAQEETEET

SSQESAEED
Length:109
Mass (Da):11,846
Last modified:August 1, 1998 - v1
Checksum:iF7821A60D96B65D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF058287 mRNA. Translation: AAC33439.1.
RefSeqiNP_990332.1. NM_205001.1.
UniGeneiGga.502.

Genome annotation databases

GeneIDi395851.
KEGGigga:395851.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF058287 mRNA. Translation: AAC33439.1.
RefSeqiNP_990332.1. NM_205001.1.
UniGeneiGga.502.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000016038.

Proteomic databases

PaxDbiO73816.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi395851.
KEGGigga:395851.

Organism-specific databases

CTDi8091.

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
HOVERGENiHBG051913.
KOiK09283.
PhylomeDBiO73816.

Gene expression databases

BgeeiENSGALG00000009875.
ExpressionAtlasiO73816. baseline.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PfamiPF02178. AT_hook. 3 hits.
[Graphical view]
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO73816_CHICK
AccessioniPrimary (citable) accession number: O73816
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.