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Protein
Submitted name:

Fork head domain protein FKD3

Gene

foxb1a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi13 – 107Fork-headPROSITE-ProRule annotationAdd BLAST95

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Fork head domain protein FKD3Imported
Submitted name:
Forkhead box B1.2Imported
Submitted name:
Forkhead box B1aImported
Submitted name:
Foxb1.2 proteinImported
Gene namesi
Name:foxb1aImported
Synonyms:fkd3Imported, foxb1.2Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 25

Organism-specific databases

ZFINiZDB-GENE-990616-47. foxb1a.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000089042.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000109160.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 107Fork-headInterPro annotationAdd BLAST95

Phylogenomic databases

eggNOGiKOG3562. Eukaryota.
COG5025. LUCA.
GeneTreeiENSGT00760000118904.
HOGENOMiHOG000007545.
HOVERGENiHBG102104.
KOiK09395.
OMAiSLCHGGQ.
OrthoDBiEOG091G0F54.
TreeFamiTF350628.

Family and domain databases

CDDicd00059. FH. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR001766. Fork_head_dom.
IPR018122. TF_fork_head_CS_1.
IPR030456. TF_fork_head_CS_2.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00250. Forkhead. 1 hit.
PRINTSiPR00053. FORKHEAD.
SMARTiView protein in SMART
SM00339. FH. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.

Sequencei

Sequence statusi: Complete.

O73779-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRPGRNTYS DQKPPYSYIS LTAMAIQSCP EKMLPLSEIY KFIMDRFPYY
60 70 80 90 100
RENTQRWQNS LRHNLSFNDC FIKIPRRPDQ PGKGSFWALH PSCGDMFENG
110 120 130 140 150
SFLRRRKRFK VMTSEHLAPS KPSDAAHYLQ QHAKLRLSAL GTHLPQMSSY
160 170 180 190 200
NLGVSQPSTF KHPFAIENII AREYKVPGGL AFSTGYPLHN QLTTAWPHMY
210 220 230 240 250
STSMMDSAAP ISMTSSDYSA YGVPIKSLCH GGQTLPAIPV PIKPTPAALP
260 270 280 290
HHIPAFLSNS PQSLSPTSPQ TATSQSSPAT PSETLTGPAT LQSVAVH
Length:297
Mass (Da):32,946
Last modified:August 1, 1998 - v1
Checksum:i8E06934453255836
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU462819 Genomic DNA. No translation available.
AF052246 mRNA. Translation: AAC06363.1.
BC056754 mRNA. Translation: AAH56754.1.
BC066395 mRNA. Translation: AAH66395.1.
RefSeqiNP_571360.1. NM_131285.1.
UniGeneiDr.75814.

Genome annotation databases

EnsembliENSDART00000125036; ENSDARP00000109160; ENSDARG00000089042.
GeneIDi30542.
KEGGidre:30542.

Similar proteinsi

Entry informationi

Entry nameiO73779_DANRE
AccessioniPrimary (citable) accession number: O73779
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: October 25, 2017
This is version 153 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported