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Protein
Submitted name:

Nuclear Y/CCAAT-box binding factor B subunit NF-YB

Gene

nfyb

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear Y/CCAAT-box binding factor B subunit NF-YBImported
Gene namesi
Name:nfybImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-1006110. nfyb.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO73744.
SMRiO73744. Positions 56-142.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini57 – 12165CBFD_NFYB_HMFInterPro annotationAdd
BLAST

Phylogenomic databases

HOVERGENiHBG008864.
KOiK08065.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
IPR003956. Transcrpt_fac_NFYB/HAP3_CS.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.
PROSITEiPS00685. NFYB_HAP3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O73744-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGDSATTDT SQLGISGDYI SGSHYVIQPH DGDTEDSLND PDDTNGSKDS
60 70 80 90 100
FREQDIYLPI ANVARIMKNA VPQTGKIAKD AKECVQECVS EFISFITSEA
110 120 130 140 150
SERCHQEKRK TINGEDILFA MSRLGFDSYV EPLKLYLQKF REAMKGEKGI
160 170 180 190 200
GGTVTTGDGL GEDLAEEPFT SQIPAGLITT DGQQQNVMVY TTSYQQISGV

QQIQFS
Length:206
Mass (Da):22,582
Last modified:August 1, 1998 - v1
Checksum:i35933B20A6D43607
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF041204 mRNA. Translation: AAC82336.1.
RefSeqiNP_001083803.1. NM_001090334.1.
UniGeneiXl.48000.

Genome annotation databases

GeneIDi399126.
KEGGixla:399126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF041204 mRNA. Translation: AAC82336.1.
RefSeqiNP_001083803.1. NM_001090334.1.
UniGeneiXl.48000.

3D structure databases

ProteinModelPortaliO73744.
SMRiO73744. Positions 56-142.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi399126.
KEGGixla:399126.

Organism-specific databases

CTDi4801.
XenbaseiXB-GENE-1006110. nfyb.

Phylogenomic databases

HOVERGENiHBG008864.
KOiK08065.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
IPR003956. Transcrpt_fac_NFYB/HAP3_CS.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.
PROSITEiPS00685. NFYB_HAP3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Xenopus NF-Y pre-sets chromatin to potentiate p300 and acetylation-responsive transcription from the Xenopus hsp70 promoter in vivo."
    Li Q., Herrler M., Landsberger N., Kaludov N., Ogryzko V.V., Nakatani Y., Wolffe A.P.
    EMBO J. 17:6300-6315(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO73744_XENLA
AccessioniPrimary (citable) accession number: O73744
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: June 8, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.