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Protein

Replication-associated protein

Gene
N/A
Organism
Miscanthus streak virus - [Japan 98]
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Replication-associated proteinUniRule annotation (EC:3.1.21.-UniRule annotation)
Short name:
RepUniRule annotation
OrganismiMiscanthus streak virus - [Japan 98]Imported
Taxonomic identifieri268778 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeMastrevirus

Subcellular locationi

  • Host nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Interactioni

Subunit structurei

Homooligomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO72916.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini24 – 126103Gemini_AL1InterPro annotationAdd
BLAST
Domaini134 – 21279Gemini_AL1_MInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the geminiviridae Rep protein family.UniRule annotation

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.

Sequencei

Sequence statusi: Complete.

O72916-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAPASSAAS NRPGPSNHPT PRWNSKQFFL TYPHCNLTPS ELMKELFSRL
60 70 80 90 100
TEKIPGYIKV SQEFHKDGDP HLHVLIQLNT KLCTRNPKFF DVQGFHPNIQ
110 120 130 140 150
PVRDAEKVFG YISKTNGDSD EMGELQLRNK KPEKPTRDQR MAMIIASSTN
160 170 180 190 200
RNEYLSMVRK EFPFDWAIRL QQFEYSAAAL FTEPPPVYQS PYPNEQIVCP
210
PELVDIIDQE WNQVTTD
Length:217
Mass (Da):25,067
Last modified:August 1, 1998 - v1
Checksum:iE27832AA74B8C49E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D00800 Genomic DNA. Translation: BAA25580.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D00800 Genomic DNA. Translation: BAA25580.1.

3D structure databases

ProteinModelPortaliO72916.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
IPR022692. Gemini_AL1_REP_central.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
PF08283. Gemini_AL1_M. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.
ProtoNetiSearch...

Publicationsi

  1. "Nucleotide sequence of cloned Miscanthus streak virus DNA."
    Sugimoto K., Hirochika H., Minobe Y., Kawamata H., Hibi T., Nanba S., Yamashita S., Tsuchizaki T.
    Submitted (AUG-1992) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO72916_9GEMI
AccessioniPrimary (citable) accession number: O72916
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: December 9, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.