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O72121

- VP2_CACV4

UniProt

O72121 - VP2_CACV4

Protein

Protein VP2

Gene

ORF3

Organism
Canine calicivirus (strain 48) (CaCV)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus By similarity.By similarity

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein VP2
    Alternative name(s):
    Minor capsid protein
    Gene namesi
    ORF Names:ORF3
    OrganismiCanine calicivirus (strain 48) (CaCV)
    Taxonomic identifieri292348 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridae
    Virus hostiCanis familiaris (Dog) (Canis lupus familiaris) [TaxID: 9615]

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell
    2. virion Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 133133Protein VP2PRO_0000100121Add
    BLAST

    Interactioni

    Subunit structurei

    May interact with capsid protein.By similarity

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the vesivirus VP2 protein family.Curated

    Family and domain databases

    InterProiIPR007996. Vesivirus_VP2.
    [Graphical view]
    PfamiPF05332. DUF743. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O72121-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVAAAITAG ASAAQAGTGL IGSIANAIHE GTRLKLQGQA LGAQIKFQEA    50
    ENKFNRDRFE FDKLNTERWF RLAKEQQSLV YELNTKGPAM RAQAMMDAGF 100
    RNNLYSNGNQ LTFNEVREAQ LSAEKRFYNP SLF 133
    Length:133
    Mass (Da):14,780
    Last modified:August 1, 1998 - v1
    Checksum:i099724FE3C3E6267
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF053720 Genomic RNA. Translation: AAC16447.1.
    AB070225 Genomic RNA. Translation: BAB83603.1.
    RefSeqiNP_777375.1. NC_004542.1.

    Genome annotation databases

    GeneIDi956317.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF053720 Genomic RNA. Translation: AAC16447.1 .
    AB070225 Genomic RNA. Translation: BAB83603.1 .
    RefSeqi NP_777375.1. NC_004542.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 956317.

    Family and domain databases

    InterProi IPR007996. Vesivirus_VP2.
    [Graphical view ]
    Pfami PF05332. DUF743. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Organization of the canine calicivirus genome from the RNA polymerase gene to the poly(A) tail."
      Roerink F., Hashimoto M., Tohya Y., Mochizuki M.
      J. Gen. Virol. 80:929-935(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    2. "Complete nucleotide sequence, genome organization and phylogenic analysis of the canine calicivirus."
      Matsuura Y., Tohya Y., Nakamura K., Shimojima M., Roerink F., Mochizuki M., Takase K., Akashi H., Sugimura T.
      Virus Genes 25:67-73(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiVP2_CACV4
    AccessioniPrimary (citable) accession number: O72121
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 9, 2004
    Last sequence update: August 1, 1998
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3