Skip Header

Contribute Send feedback
Read comments (?) or add your own

O71153 (VNCS_DSDNV) Reviewed, UniProtKB/Swiss-Prot

Last modified April 5, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Non-capsid protein NS-1
Alternative name(s):
NCVP1
Non-structural protein NS1
Gene names
Name:NS1
OrganismDiatraea saccharalis densovirus (DsDNV) [Complete proteome]
Taxonomic identifier72003 [NCBI]
Taxonomic lineageVirusesssDNA virusesParvoviridaeDensovirinaeDensovirus
Virus hostDiatraea saccharalis (sugarcane borer) [TaxID: 40085]

Protein attributes

Sequence length545 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the parvoviruses non-capsid protein family.

Contains 1 SF3 helicase domain.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processviral genome replication

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 545545Non-capsid protein NS-1
PRO_0000222479

Regions

Domain346 – 545200SF3 helicase

Sequences

Sequence LengthMass (Da)Tools
O71153 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 810A0E440432E2B1

FASTA54563,476
        10         20         30         40         50         60 
MNNGDSNRET DSTTRSDQSN LRESPTRSPS SEQCSMVATT SRKREWAYGG RGTMASLAKE 

        70         80         90        100        110        120 
SQENFQYMAE ELEKMGNQFF GYVTGQSVKP SSAYISDVII LRDIQLRDQC LDVLREYGRS 

       130        140        150        160        170        180 
RRNGLFGFSE EGDHIHVIHD CSYTNRSCRD IWLGQVKPFG TVQKTGKPVK YIWEFKRTDW 

       190        200        210        220        230        240 
YDVFIYFFIR KRGERAIYIR GESGKIPSND ECVRWAREFK EREMVSSSDC TDYYECEQQE 

       250        260        270        280        290        300 
HKISRRSDAG STNGRLYEKK TYSAGKFAYI RQKTKALLRK YYVSPISAIC DVPEFRDDDL 

       310        320        330        340        350        360 
LCDPKNRDYI QAACEDFGKD LNAMSLREIY NLLTEDYNFT DDKELNPYAQ FISSMKYDNL 

       370        380        390        400        410        420 
EGSLNIVNEL LKYQCNDDED LIVEFLTNLV NVLDRRIPKL NAFLIISPPS GGKNFFFDMI 

       430        440        450        460        470        480 
FGLLLSYGQL GQANRHNLFA FQEAPNKRVL LWNEPNYESS LTDTIKMMFG GDPYTVRVKN 

       490        500        510        520        530        540 
RMDAHVKRTP VIILTNNTVP FMYELAFSDR IIQYKWNAAP FLKDYELKPH PMTFFLLLSK 


YNITF 

« Hide

References

[1]"Complete nucleotide sequence and genome organization of an infectious clone of Diatraea saccharalis densovirus (DsDNV)."
Boublik Y., Kouassi K.N., Cavallaro C., Bergoin M.
Submitted (DEC-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF036333 Genomic DNA. Translation: AAC17999.1.
RefSeqNP_046813.1. NC_001899.1.

3D structure databases

ProteinModelPortalO71153.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1449608.

Family and domain databases

InterProIPR014015. Helicase_SF3_DNA-vir.
IPR001257. Parvovirus_NS1_helicase.
[Graphical view]
PfamPF01057. Parvo_NS1. 1 hit.
[Graphical view]
PROSITEPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVNCS_DSDNV
AccessionPrimary (citable) accession number: O71153
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: August 1, 1998
Last modified: April 5, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families