Unreviewed,
UniProtKB/TrEMBL O70369 (O70369_RAT)
Last modified
January 19, 2010.
Version 48.
History...
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Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Class A calcium channel variant riA-II EMBL AAC24517.1 | ||||
| Gene names |
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| Organism | Rattus norvegicus (Rat) EMBL AAC24517.1 | ||||
| Taxonomic identifier | 10116 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 550 AA. |
| Sequence status | Fragment. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Transport |
| Cellular component | Membrane |
| Domain | Transmembrane RuleBase RU003378V0 |
| Molecular function | Ionic channel RuleBase RU003378V0 |
| Gene Ontology (GO) | |
| Biological process | calcium ion transport Ref.1 Inferred from direct assay. Source: RGD synaptic transmissionInferred from mutant phenotype. Source: RGD transmembrane transportInferred from electronic annotation. Source: InterPro |
| Cellular component | perikaryon Inferred from direct assay. Source: RGD voltage-gated calcium channel complex Ref.1Inferred from direct assay. Source: RGD |
| Molecular function | voltage-gated calcium channel activity Ref.1 Inferred from direct assay. Source: RGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Experimental info | ||||||||
|---|---|---|---|---|---|---|---|---|
| Non-terminal residue | 1 | 1 | EMBL AAC24517.1 | |||||
Sequences
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References
| [1] | "Class A calcium channel variants in pancreatic islets and their role in insulin secretion." Ligon B., Boyd A.E. 3rd, Dunlap K. J. Biol. Chem. 273:13905-13911(1998) [PubMed: 9593738] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL AAC24517.1. Tissue: Pancreatic islet EMBL AAC24517.1. |
| [2] | Ligon B.B., Boyd A.E. III, Dunlap K. Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL AAC24517.1. Tissue: Pancreatic islet EMBL AAC24517.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF051527 mRNA. Translation: AAC24517.1. |
| IPI | IPI00197595. |
| UniGene | Rn.87769 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | O70369. |
Genome annotation databases | |
| Ensembl | ENSRNOT00000003569; ENSRNOP00000003569; ENSRNOG00000002559; Rattus norvegicus. [Genome view] |
Phylogenomic databases | |
| HOVERGEN | O70369. |
Gene expression databases | |
| ArrayExpress | O70369. |
| Genevestigator | O70369. |
Family and domain databases | |
| InterPro | IPR005821. Ion_trans. IPR014873. VDCC_a1su_IQ. IPR005448. VDCC_P/Q_a1su. [Graphical view] |
| PANTHER | PTHR10037:SF59. PQVDCCAlpha1. 1 hit. |
| Pfam | PF08763. Ca_chan_IQ. 1 hit. PF00520. Ion_trans. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | O70369_RAT | ||||||||
| Accession | Primary (citable) accession number: O70369 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||
