Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Regulatory protein

Gene

merR

Organism
Lysinibacillus sphaericus (Bacillus sphaericus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory proteinImported
Gene namesi
Name:merRImported
Encoded oniPlasmid pKLH301Imported
OrganismiLysinibacillus sphaericus (Bacillus sphaericus)Imported
Taxonomic identifieri1421 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeLysinibacillus

Structurei

3D structure databases

ProteinModelPortaliO70107.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 7171HTH merR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O70107-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQFRIGELAE KCSVNKETIR YYERLGLIPE PDRTEKGYRM YSEQTVDRLN
60 70 80 90 100
FIKRMQELDF TLNEIDKLLG VVDRDETKCR DMYDFTVLKI EDIQRKIEDL
110 120 130
KRIERILVDL KERCPENKDI YECPVIETLM KK
Length:132
Mass (Da):15,989
Last modified:August 1, 1998 - v1
Checksum:iE6628416136E2A94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y09027 Genomic DNA. Translation: CAA70242.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y09027 Genomic DNA. Translation: CAA70242.1.

3D structure databases

ProteinModelPortaliO70107.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Horizontal spread of mer operons among Gram-positive bacteria in natural environments."
    Bogdanova E.S., Bass I.A., Minhakhin L.S., Petrova M.A., Mindlin S.Z., Volodin A.A., Kalyaeva E.S., Tiedge G.M., Hobman J.L., Brown N.L., Nikifirov V.G.
    Microbiology 144:609-620(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FA8-2Imported.
    Plasmid: pKLH301
  2. Minakhin L.S.
    Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FA8-2Imported.
    Plasmid: pKLH301

Entry informationi

Entry nameiO70107_LYSSH
AccessioniPrimary (citable) accession number: O70107
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: May 11, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.