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Protein
Submitted name:

Putative lysine/ornithine decarboxylase

Gene

SCO6035

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Pyridoxal phosphateSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative lysine/ornithine decarboxylaseImported
Gene namesi
Ordered Locus Names:SCO6035Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6035.

Structurei

3D structure databases

ProteinModelPortaliO69865.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 273243Orn_Arg_deC_NInterPro annotationAdd
BLAST
Domaini283 – 385103Orn_DAP_Arg_deCInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Orn/Lys/Arg decarboxylase class-II family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107QJB. Bacteria.
COG0019. LUCA.
HOGENOMiHOG000274132.
InParanoidiO69865.
KOiK01581.
OMAiRVHYGNT.
OrthoDBiEOG6Z9B18.
PhylomeDBiO69865.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEiPS00878. ODR_DC_2_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O69865-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPLTAADLG APLAAALAAA TEDRLVYDLA GIERRHDTLR NELPGVHVRF
60 70 80 90 100
AMKACPVDEV LAALAGRGAG ADAASPGEVE QALRAGVPAG RVHYGNTVKS
110 120 130 140 150
DRNIAEAHRL GVRTFATDSL QDVAALAVHA PGARVFCRVA TGGAGALWGL
160 170 180 190 200
SNKFGCPPGD AVRVLVAARD AGLVPAGLSV HVGSQQMTSE AWHGAVDDLG
210 220 230 240 250
DVLRALGRHG IRVDHVNLGG GLPALGYRDR HGAPLDPPLD KIFAVIREGM
260 270 280 290 300
DELRRIHGGH LDFVVEPGRH LVADHGAIRA HVVRLTERRA ADGERQHWLY
310 320 330 340 350
LSCGKFNGLY EMDALQYRLV FPGHPDGPCV PAVVAGPTCD SDDAYSHEEG
360 370 380 390 400
LVPVPAALAS GDPVWVLSCG AYATSYTTRG FNGFAPLPYA FAGRPERTGA

DD
Length:402
Mass (Da):42,261
Last modified:August 1, 1998 - v1
Checksum:iC4EB768AB553C465
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA19247.1.
PIRiT34715.
RefSeqiNP_630146.1. NC_003888.3.
WP_011030609.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19247; CAA19247; CAA19247.
GeneIDi1101476.
KEGGisco:SCO6035.
PATRICi23741976. VBIStrCoe124346_6135.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939126 Genomic DNA. Translation: CAA19247.1.
PIRiT34715.
RefSeqiNP_630146.1. NC_003888.3.
WP_011030609.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO69865.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6035.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19247; CAA19247; CAA19247.
GeneIDi1101476.
KEGGisco:SCO6035.
PATRICi23741976. VBIStrCoe124346_6135.

Phylogenomic databases

eggNOGiENOG4107QJB. Bacteria.
COG0019. LUCA.
HOGENOMiHOG000274132.
InParanoidiO69865.
KOiK01581.
OMAiRVHYGNT.
OrthoDBiEOG6Z9B18.
PhylomeDBiO69865.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
IPR002433. Orn_de-COase.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSiPR01179. ODADCRBXLASE.
PR01182. ORNDCRBXLASE.
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
PROSITEiPS00878. ODR_DC_2_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.

Entry informationi

Entry nameiO69865_STRCO
AccessioniPrimary (citable) accession number: O69865
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: June 8, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.