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Protein
Submitted name:

Uncharacterized protein

Gene

SCO6425

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SCO6425Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6425.

Structurei

3D structure databases

ProteinModelPortaliO69819.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini159 – 256HTH araC/xylS-type DNA-bindingInterPro annotationAdd BLAST98

Phylogenomic databases

eggNOGiENOG410XRNF. LUCA.
HOGENOMiHOG000111165.
InParanoidiO69819.
OMAiHPWGQLS.
OrthoDBiPOG091H09TX.
PhylomeDBiO69819.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51182. SSF51182. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O69819-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVTRELPAL AAGEVDVSFV IKAYAEVVAA DTTWTEHSHP WHELLWNAHG
60 70 80 90 100
ASTAVTGSQV WCVTPTLGLW MPAGQLHSAS AVAGTSYRAH FFRHGTVSAL
110 120 130 140 150
PDEPVAVDIT PLLRLLLDRL GEPDLPPRSR DVTEAMVLDV LRPSPRALLV
160 170 180 190 200
HLPTSALLRP IVDAVRADPS DQRTLTGWAT VLGCSERTLT RAFRTETGTS
210 220 230 240 250
FARWVASVRA QHAVRLLARG FEVEVVADAV GYRSASAFGA AFRRTTGTTP

GRFRAP
Length:256
Mass (Da):27,762
Last modified:August 1, 1998 - v1
Checksum:i1971B47CBEB684C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA18912.1.
PIRiT28695.
RefSeqiNP_630511.1. NC_003888.3.
WP_003972553.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA18912; CAA18912; CAA18912.
GeneIDi1101864.
KEGGisco:SCO6425.
PATRICi23742757. VBIStrCoe124346_6525.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA18912.1.
PIRiT28695.
RefSeqiNP_630511.1. NC_003888.3.
WP_003972553.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO69819.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6425.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA18912; CAA18912; CAA18912.
GeneIDi1101864.
KEGGisco:SCO6425.
PATRICi23742757. VBIStrCoe124346_6525.

Phylogenomic databases

eggNOGiENOG410XRNF. LUCA.
HOGENOMiHOG000111165.
InParanoidiO69819.
OMAiHPWGQLS.
OrthoDBiPOG091H09TX.
PhylomeDBiO69819.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51182. SSF51182. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO69819_STRCO
AccessioniPrimary (citable) accession number: O69819
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: November 30, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.