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Protein
Submitted name:

Uncharacterized protein

Gene

SCO6425

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi176 – 197H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi223 – 246H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SCO6425Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6425.

Structurei

3D structure databases

ProteinModelPortaliO69819.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini159 – 256HTH araC/xylS-type DNA-bindingInterPro annotationAdd BLAST98

Phylogenomic databases

eggNOGiENOG410XRNF. LUCA.
HOGENOMiHOG000111165.
InParanoidiO69819.
OMAiGMSERSM.
OrthoDBiPOG091H09TX.
PhylomeDBiO69819.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
PfamiView protein in Pfam
PF12833. HTH_18. 1 hit.
SMARTiView protein in SMART
SM00342. HTH_ARAC. 1 hit.
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51182. SSF51182. 1 hit.
PROSITEiView protein in PROSITE
PS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O69819-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVTRELPAL AAGEVDVSFV IKAYAEVVAA DTTWTEHSHP WHELLWNAHG
60 70 80 90 100
ASTAVTGSQV WCVTPTLGLW MPAGQLHSAS AVAGTSYRAH FFRHGTVSAL
110 120 130 140 150
PDEPVAVDIT PLLRLLLDRL GEPDLPPRSR DVTEAMVLDV LRPSPRALLV
160 170 180 190 200
HLPTSALLRP IVDAVRADPS DQRTLTGWAT VLGCSERTLT RAFRTETGTS
210 220 230 240 250
FARWVASVRA QHAVRLLARG FEVEVVADAV GYRSASAFGA AFRRTTGTTP

GRFRAP
Length:256
Mass (Da):27,762
Last modified:August 1, 1998 - v1
Checksum:i1971B47CBEB684C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA18912.1.
PIRiT28695.
RefSeqiNP_630511.1. NC_003888.3.
WP_003972553.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA18912; CAA18912; CAA18912.
GeneIDi1101864.
29663691.
KEGGisco:SCO6425.
PATRICifig|100226.15.peg.6525.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO69819_STRCO
AccessioniPrimary (citable) accession number: O69819
Entry historyiIntegrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: July 5, 2017
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported