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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Rv3730c

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Submitted name:
Mycobacterium tuberculosis H37Rv complete genomeImported
Gene namesi
Ordered Locus Names:Rv3730cImported
ORF Names:LH57_20330Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
ProteomesiUP000001584 Componenti: Chromosome UP000031768 Componenti: Chromosome

Organism-specific databases

TubercuListiRv3730c.

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv3730c.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

O69697-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAAEELDV DGIAVRLTSP DRMYFPKLGS HGTKRRLVEY YFAVAGGPML
60 70 80 90 100
TALRDRPTHL QRFPDGVDGE QIYQKRIPRH RPDYLQTCRV TFPSGRMADA
110 120 130 140 150
LKVTHPAAIV WAAQMGTITL HPWQVRCPDT EHPDELRIDL DPQPGTGFVE
160 170 180 190 200
ARTVAVDVLR SVLDDLGLVG YPKTSGGRGI HVFLRIATDW DFVEVRRAGI
210 220 230 240 250
ALAREVERRA PDAVTTSWWK EERGARIFID FNQNARDRTM ASAYSVRPTP
260 270 280 290 300
IATVSMPLTW EELAGADPDD YTMTTVPELV KIRDDPWAGM DDVAQSIAPL
310 320 330 340
LDLAAADEER GLGDMPYPPN YPKMPGEPKR VQPSRDTDLK GGNTSK
Length:346
Mass (Da):38,544
Last modified:August 1, 1998 - v1
Checksum:i11E77E93FBCD155B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16520.1.
AL123456 Genomic DNA. Translation: CCP46557.1.
RefSeqiNP_218247.1. NC_000962.3.
WP_003899657.1. NZ_KK339374.1.
YP_006517224.1. NC_018143.2.

Genome annotation databases

EnsemblBacteriaiAFN51753; AFN51753; RVBD_3730c.
CCP46557; CCP46557; Rv3730c.
KBJ24804; KBJ24804; P425_03881.
GeneIDi885201.
KEGGimtu:Rv3730c.
mtv:RVBD_3730c.
PATRICi18130195. VBIMycTub22151_4188.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16520.1.
AL123456 Genomic DNA. Translation: CCP46557.1.
RefSeqiNP_218247.1. NC_000962.3.
WP_003899657.1. NZ_KK339374.1.
YP_006517224.1. NC_018143.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv3730c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFN51753; AFN51753; RVBD_3730c.
CCP46557; CCP46557; Rv3730c.
KBJ24804; KBJ24804; P425_03881.
GeneIDi885201.
KEGGimtu:Rv3730c.
mtv:RVBD_3730c.
PATRICi18130195. VBIMycTub22151_4188.

Organism-specific databases

TubercuListiRv3730c.

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported and H37RvImported.
  2. "Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv."
    Camus J.C., Pryor M.J., Medigue C., Cole S.T.
    Microbiology 148:2967-2973(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: H37RvImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: H37RvImported.
  4. Lew J.M.
    Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: H37RvImported.
  5. "Phylogenetic analysis of Mycobacterial species using whole genome sequences."
    Hazbon M.H., Riojas M.A., Damon A.M., Alalade R.O., Cantwell B.J., Monaco A., King S., Sohrabi A.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27294 / TMC 102 / H37RvImported and H37RvImported.

Entry informationi

Entry nameiO69697_MYCTU
AccessioniPrimary (citable) accession number: O69697
Secondary accession number(s): F2GFV2, I6Y4E1, Q7D4Z3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: June 24, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.