O69262 (O69262_9BACL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinofuranosidase EMBL CAA76421.2
EC=3.2.1.55 EMBL CAA76421.2

Gene names

Name:

AbjA EMBL CAA76421.2

Organism

Thermobacillus xylanilyticus EMBL CAA76421.2

Taxonomic identifier

76633 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Paenibacillaceae › Thermobacillus

Protein attributes

Sequence length	496 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Glycosidase EMBL CAA76421.2 Hydrolase
Technical term	3D-structure PDB 2VRK PDB 2VRQ
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O69262 [UniParc]. Last modified March 1, 2001. Version 2. Checksum: BCF667E569273163	FASTA	496	56,114
	10 20 30 40 50 60 MNVASRVVVN ADRVKGTINR NIYGHFSEHL GRCIYEGLWV GEDSPIPNTN GIRNDVLEAL 70 80 90 100 110 120 KQMKIPVLRW PGGCFADEYH WKDGVGPREK RKRMVNTHWG GVIENNHFGT HEFMMLCELL 130 140 150 160 170 180 GCEPYISGNV GSGTVQEMSE WVEYITFDGE SPMANWRREN GREKPWRIKY WGVGNENWGC 190 200 210 220 230 240 GGNMRAEYYA DLYRQFQTYL RNYGDNKLHK IACGANTADY HWTEVLMKQA APFMHGLSLH 250 260 270 280 290 300 YYTVPGPWEK KGPATGFTTD EWWVTLKKAL FMDRLVTKHS AIMDVYDPDK RIDLIVDEWG 310 320 330 340 350 360 TWYDVEPGTN PGFLYQQNSI RDALVAGATL HIFHRHCDRV RMANIAQLVN VLQSVILTEG 370 380 390 400 410 420 ERMLLTPTYH VFNMFKVHQD AELLDTWESV ERTGPEGELP KVSVSASRAA DGKIHISLCN 430 440 450 460 470 480 LDFETGASVD IELRGLNGGV SATGTTLTSG RIDGHNTFDE PERVKPAPFR DFKLEGGHLN 490 ASLPPMSVTV LELTAG

References

[1]	"A single domain thermophilic xylanase can bind insoluble xylan: evidence for surface aromatic clusters." Connerton I., Cummings N., Harris G.W., Debeire P., Breton C. Biochim. Biophys. Acta 1433:110-121(1999) [PubMed: 10446364] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: D3 EMBL CAA76421.2.
[2]	"Genetic and biochemical characterization of a highly thermostable alpha-L-arabinofuranosidase from Thermobacillus xylanilyticus." Debeche T., Cummings N., Connerton I., Debeire P., O'Donohue M.J. Appl. Environ. Microbiol. 66:1734-1736(2000) [PubMed: 10742272] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: D3 EMBL CAA76421.2.
[3]	Connerton I.F. Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: D3 EMBL CAA76421.2.
[4]	"The structure of the complex between a branched pentasaccharide and Thermobacillus xylanilyticus GH-51 arabinofuranosidase reveals xylan-binding determinants and induced fit." Paes G., Skov L.K., O'Donohue M.J., Remond C., Kastrup J.S., Gajhede M., Mirza O. Biochemistry 47:7441-7451(2008) [PubMed: 18563919] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Y16849 Genomic DNA. Translation: CAA76421.2.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2VRK	X-ray	2.20	A/B/C	1-496	[»]
2VRQ	X-ray	2.00	A/B/C	1-496	[»]

ProteinModelPortal

O69262.

ModBase

Search...

Protein family/group databases

CAZy

GH51. Glycoside Hydrolase Family 51.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Enzyme and pathway databases

BRENDA

3.2.1.55. 191843.

Family and domain databases

InterPro

IPR010720. Alpha-L-AF_C.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Pfam

PF06964. Alpha-L-AF_C. 1 hit.
[Graphical view]

SMART

SM00813. Alpha-L-AF_C. 1 hit.
[Graphical view]

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

O69262_9BACL

Accession

Primary (citable) accession number: O69262

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	March 1, 2001
Last modified:	September 21, 2011
This is version 42 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)